| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1681 |
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| Symbol | |
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| ID | 4460003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2060040 |
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| End bp | 2061197 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639702450 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_845803 |
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| Protein GI | 116749116 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.681493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGCA CGATGTCATT GATCGGGAAA TCGTTGGCGG TATTGCTGAT CGGTCTGCTC
GTCGTTCCGG CCGCAGCCTG GTGCAAGGAG CCGTACAAGA TCGGCGGGCT TTTTTCCGTA
ACCGGTCCAA GCTCATTCCT GGGAGACCCC GAGAAGAAAA GCCTGGAACT GGCGATTGAC
GAGATCAACG CCCGGGGCGG AATCGACGGG CACCTTCTGG AGGCGGTCAT TTACGACACC
GAGGGCGATC CCGGCAAGAC GAACCTCAAC GCGAGCAAGC TGATGACCAA GGATAACGTC
ATCGCGATCA TCGGTCCAAG CCTCACGCCC ACCACTCTCG CCATCGTGCC CCTGGCCGAG
AAACAGCCTG TCCCCCTGAT CAGCTGCGCG GCCGGTATCC TGATCACGGA GCCGGTGAAG
CCCTGGGTCT TCAAGACGGC TCAGAGCGAT GTCCTGGCGG TGGCGGCGAT TTATGGGCAC
ATGCAGAAGA AGAATATAAA GAAAGTGGGG ATCATCACGG TGGAGAGCGC CTACGGCGAA
AGCGGGCGCG ACCAGTTGAC GGCGCAGGCC CCGAAATTCG GCATACAGGT GGTGCAGGCT
GAAACCTTCG GCGCCAAGGA TACCGATATG ACCGCGCAGC TGACGAAAGT CCGCAGTGCC
CAGCCCGAGG CCGTGATCTG CTGGGGCACC AACCCCGGTC CGGCGGTCAT CGCCAGAAAC
TTTCAGCAGA TGGGATTCAA GATCCCGCTC TACCAGAGCC ACGGGGTGGC TTCTCCCAAG
TTTGTCGAGC TTGCGGGGGA GGCGGCGGAA AACATTGTTC TGCCGGCCGG CAAGATACTG
GTGACGGACC AGCTTCCCGA CTCCGATCCG CAGAAGGCCG TGCTCAAACG CTATGTGGAA
CAGTTCACCG GTCGTTTCAA ACAGCCCGTG TCGCCGTTCG GCGGGTATGC CTACGATGCC
ATGATGATTC TGGCCAAGGC GCTGGAAGGC ACGGAGGGAA AGAAGGACGC CGTGCGCAAG
AGAATCGAGG AAGTCAGGGG ACTCGTCGGA GTGACCGGTA CATTCAATTT CTCCCCTCAG
GATCATAACG GCCTTGGTCC GGACGCCTTC GTCATGGTGC AGATTCAGAA CGGGAAGTTC
AAGGTGATCG ATCAATAG
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| Protein sequence | MNRTMSLIGK SLAVLLIGLL VVPAAAWCKE PYKIGGLFSV TGPSSFLGDP EKKSLELAID
EINARGGIDG HLLEAVIYDT EGDPGKTNLN ASKLMTKDNV IAIIGPSLTP TTLAIVPLAE
KQPVPLISCA AGILITEPVK PWVFKTAQSD VLAVAAIYGH MQKKNIKKVG IITVESAYGE
SGRDQLTAQA PKFGIQVVQA ETFGAKDTDM TAQLTKVRSA QPEAVICWGT NPGPAVIARN
FQQMGFKIPL YQSHGVASPK FVELAGEAAE NIVLPAGKIL VTDQLPDSDP QKAVLKRYVE
QFTGRFKQPV SPFGGYAYDA MMILAKALEG TEGKKDAVRK RIEEVRGLVG VTGTFNFSPQ
DHNGLGPDAF VMVQIQNGKF KVIDQ
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