Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1680 |
Symbol | |
ID | 4460002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2059086 |
End bp | 2059961 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639702449 |
Product | inner-membrane translocator |
Protein accession | YP_845802 |
Protein GI | 116749115 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGAGT TTCTTCAGTA CGTTTTCTCA GGGGTCACCA ATGGCTCGGT CTACGCCATT ATCGCCCTGG GATTTTCCAT GCTGTTCAGC ATGACGGGTC TGATCAATTT CGCCCAGGGG GAATTCGTCA TGCTGGGCGC GCTGGGCATG ATTTCCCTGT GGAAAGGAGC GGGGCTGCCG CTGCCGGCCG CCATTGTGCT TTCCACCATC GGGGTGTCCG CGGTCGGGTT GCTCCTGGAG CGGGCGGCGA TACGCAATGT GCGCAAACCT CACCCGATCG TTCTTGTCAT CGTGACGATT GGAGCGTCCA TTTTCCTGCG GGGAGCGGGC ATGATCGGAT GGGGCAAGGA GTCGTACAGC TCGCCCGCCT TCTCACGCCA GGGCGCATTT GAAGTTGCCG GCGCCACGCT TCTGCCCCAG AGCCTGTTTA TTCTGGCCGC GGTTTTGCTC ATCGTCTTCG GCTTGCAGTT CTTCCACCGC AGGACGCTTA CCGGAAAGGC CATGCTGGCC TGCGCCATCA GCAAGAGAGC GGCGTGGCTC CAGGGCATTC CAAGCGAAAG ACTGGTGCTG CTGGCTTTCG CGCTGAGCGC GGGAATGGGG GCGATAGGAG GCATTCTTAT CGCGCCGATC TCGATGAGCA GCTACGACAT GGGGATGACA CTCGGCCTGA AAGGCTTCTG TGCCGCGATG CTCGGCGGAT TGGGCAGCTC TCTCGGGGCG GTGCTGGGGG GCCTCCTGTT GGGGCTGCTG GAAGCCTTCG GGGTCGGTTT CTTCTCCTCG AGCCTCAAGG ATGCCATCGC CTTCGTTTTG CTCCTGGGCA TTCTCTATGT CCGTCCGGGA GGGATACTCG GGGCGAAAGT GGTGAAAAGG TTCTAG
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Protein sequence | MQEFLQYVFS GVTNGSVYAI IALGFSMLFS MTGLINFAQG EFVMLGALGM ISLWKGAGLP LPAAIVLSTI GVSAVGLLLE RAAIRNVRKP HPIVLVIVTI GASIFLRGAG MIGWGKESYS SPAFSRQGAF EVAGATLLPQ SLFILAAVLL IVFGLQFFHR RTLTGKAMLA CAISKRAAWL QGIPSERLVL LAFALSAGMG AIGGILIAPI SMSSYDMGMT LGLKGFCAAM LGGLGSSLGA VLGGLLLGLL EAFGVGFFSS SLKDAIAFVL LLGILYVRPG GILGAKVVKR F
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