Gene Sfum_1680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1680 
Symbol 
ID4460002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2059086 
End bp2059961 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content61% 
IMG OID639702449 
Productinner-membrane translocator 
Protein accessionYP_845802 
Protein GI116749115 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAGT TTCTTCAGTA CGTTTTCTCA GGGGTCACCA ATGGCTCGGT CTACGCCATT 
ATCGCCCTGG GATTTTCCAT GCTGTTCAGC ATGACGGGTC TGATCAATTT CGCCCAGGGG
GAATTCGTCA TGCTGGGCGC GCTGGGCATG ATTTCCCTGT GGAAAGGAGC GGGGCTGCCG
CTGCCGGCCG CCATTGTGCT TTCCACCATC GGGGTGTCCG CGGTCGGGTT GCTCCTGGAG
CGGGCGGCGA TACGCAATGT GCGCAAACCT CACCCGATCG TTCTTGTCAT CGTGACGATT
GGAGCGTCCA TTTTCCTGCG GGGAGCGGGC ATGATCGGAT GGGGCAAGGA GTCGTACAGC
TCGCCCGCCT TCTCACGCCA GGGCGCATTT GAAGTTGCCG GCGCCACGCT TCTGCCCCAG
AGCCTGTTTA TTCTGGCCGC GGTTTTGCTC ATCGTCTTCG GCTTGCAGTT CTTCCACCGC
AGGACGCTTA CCGGAAAGGC CATGCTGGCC TGCGCCATCA GCAAGAGAGC GGCGTGGCTC
CAGGGCATTC CAAGCGAAAG ACTGGTGCTG CTGGCTTTCG CGCTGAGCGC GGGAATGGGG
GCGATAGGAG GCATTCTTAT CGCGCCGATC TCGATGAGCA GCTACGACAT GGGGATGACA
CTCGGCCTGA AAGGCTTCTG TGCCGCGATG CTCGGCGGAT TGGGCAGCTC TCTCGGGGCG
GTGCTGGGGG GCCTCCTGTT GGGGCTGCTG GAAGCCTTCG GGGTCGGTTT CTTCTCCTCG
AGCCTCAAGG ATGCCATCGC CTTCGTTTTG CTCCTGGGCA TTCTCTATGT CCGTCCGGGA
GGGATACTCG GGGCGAAAGT GGTGAAAAGG TTCTAG
 
Protein sequence
MQEFLQYVFS GVTNGSVYAI IALGFSMLFS MTGLINFAQG EFVMLGALGM ISLWKGAGLP 
LPAAIVLSTI GVSAVGLLLE RAAIRNVRKP HPIVLVIVTI GASIFLRGAG MIGWGKESYS
SPAFSRQGAF EVAGATLLPQ SLFILAAVLL IVFGLQFFHR RTLTGKAMLA CAISKRAAWL
QGIPSERLVL LAFALSAGMG AIGGILIAPI SMSSYDMGMT LGLKGFCAAM LGGLGSSLGA
VLGGLLLGLL EAFGVGFFSS SLKDAIAFVL LLGILYVRPG GILGAKVVKR F