Gene Sfum_1665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1665 
Symbol 
ID4460037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2043433 
End bp2044629 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content58% 
IMG OID639702434 
Productaminotransferase, class I and II 
Protein accessionYP_845787 
Protein GI116749100 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0122976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTTG CCGAAAGAGT ATCAAGAATC AAACCATCGG CCACATTGAC CATCAATTCG 
AAGGCGAAGG CACTGAAACA GAGTGGTGTT CACGTGGTGA ACTTCGGTGT CGGCGAACCC
GATTTCGATA CCCCTTCGCA CATTCAGGAA GCAGCCGTGG AAAGCATGCG CAACGGTCAG
ACGCGCTATA CGGCCGTGGG CGGCATCGAC GAGCTCAAAG ACGCCGTTTG CCGGGATATC
GAGAACGGCT ACGGCCTTAC ATACAAACGT GAAAACGTGT TGATTTCCTG CGGTGGGAAG
CACGCTTTGT ACAACCTGTT TCAGGCCGTC CTGGATCCGG GTGACGAGGT GATCATTCCC
TCTCCTTACT GGGTCTCCTA TCCTGACATG GTGGAACTGG CAGGGGCGGT TCCGGTGGCG
GTCCCGTGCT CCGAGCAAAA CGCGTTCAAA TTGCAGCCGG AGCAACTCGA GAAGGCCATC
ACGTCCCGCA CCCGGCTCTT TATCATCAAC AGTCCGAGCA ATCCGACGGG GACCCACTAC
ACCGCTTCGG ATCTGAAGGG ACTGGCAGAG GTGCTCGCCC GTCACCCCGG TGTGCTCATC
GCCAGTGACG ACATTTACTG TCGGATCCTG TTCGGAGGCC GTGAGTGGAC CAACCTTGCC
ATGGTGGACG AACGGATGAT CGACCGGTGT TTCATCATCA ACGGAGTGAG CAAGACCTAC
TGCATGACGG GGTGGAGAAT CGGCTACCTG ATCGGAAATG AGGAAGTGAT TCGCGCCGCC
ACAAAGATCC AGGGGCAATC GACCAGCAAT CCGACCTCCA TCTCCCAATA TGCCAGTTTG
GCCGCCCTCA ACGGCGACCG GCGTCTTGTC GACCAGATGG TGCGAACCTT CGAGGAGCGG
TCCCGATATG TGCTTGCGAG GATCGGCGAG CTGCACGGCG TCACGTGTCC GACTCCCGCG
GGCGCTTTCT ATGTCTTTCC CAATTTCAGC GCTTACTTCG GCAGGAAGGT GGGGGGCGCA
AGCATTGCGA ATTCGCTCGA CCTTGCCGAC TACCTTATGG AGAAAGCACA CGTCGCCGTG
GTGCCCGGAA GCCCCTTCGG AGAGGATCGG TGCATCCGCA TCTCCTATGC GCTGTCGATG
GACGATCTGA AGGAGGGGTT CGATCGAATC GGCACCGCGC TGGCGGCCCT TCAATAG
 
Protein sequence
MKLAERVSRI KPSATLTINS KAKALKQSGV HVVNFGVGEP DFDTPSHIQE AAVESMRNGQ 
TRYTAVGGID ELKDAVCRDI ENGYGLTYKR ENVLISCGGK HALYNLFQAV LDPGDEVIIP
SPYWVSYPDM VELAGAVPVA VPCSEQNAFK LQPEQLEKAI TSRTRLFIIN SPSNPTGTHY
TASDLKGLAE VLARHPGVLI ASDDIYCRIL FGGREWTNLA MVDERMIDRC FIINGVSKTY
CMTGWRIGYL IGNEEVIRAA TKIQGQSTSN PTSISQYASL AALNGDRRLV DQMVRTFEER
SRYVLARIGE LHGVTCPTPA GAFYVFPNFS AYFGRKVGGA SIANSLDLAD YLMEKAHVAV
VPGSPFGEDR CIRISYALSM DDLKEGFDRI GTALAALQ