Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1659 |
Symbol | |
ID | 4460031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 2034916 |
End bp | 2037003 |
Gene Length | 2088 bp |
Protein Length | 695 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639702428 |
Product | hypothetical protein |
Protein accession | YP_845781 |
Protein GI | 116749094 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.562839 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCATCT CTATCGGGCG GAGACAATTC CTTTCGACAA TGAGTTCCCT GCTCGCCCTG GTCGGACTGC CCTTCACGGG ACCTCCGGGC GCAAGGGCAG CCGATGTACC ACTGCTTCAG ATTCTTCGCG ACAGGTATCC GAGAGTGTTT GCCTTCCGTC AGGCGGAAGT GCTCGCGAAC CTCAGAGATT ACTCGAGTTG GGACACTGCG TTACGCCCCC TGGCGGGCGT CGTCGGCAAG CTGATCCCCG AGGAACGAAC GGATACCGTT ACGGAGAGAA ATATCAGGTA TTTTAGACAG TTCAAGAAGC GTTACCCCCA CAAGGTCACA CTGCTCCACC TGAACGGCCG CTCCCGGCTT CCCACCTTCG AGACGGAGGG CTGGTACGCG GGCTGGTGGC TTTACCAGGC CGGGACTCTG ATGGTCGAAT CGTTGACCAG GTCTGCCACT CGCATTTCCG TTTCCGATAT CGGACGGTTT GAGCTGGAAG CCGACGGATT CGGGAACCTG TGGGAAGACC TTATCATAAC CGCACGAAAA CCCAATGGAA AACCCAATTT TGCCATCGTC GAGCACATTC GCCTCGTACG CATCAACACT GCCGCCTCCG CGCTCATTGT CAGGCGGGGC CAGTACGGAT CGATTGCCCG GGCGTGGCCG GCCGGCAGCT ACGTTGCGGC GCACGCCACG GAAGGTCCTT ACTTTCCCGG GGGACAAAAG CTCTGGTGTT ATAACCTCTC GACACTATCG CCACGGGATT CCGCGGGACG CCATGTCATC GACGCAATGA TCGACGGGCT GCAGCCACGT TTTGCATCCG GCGGGAGTCT CGACTTCCTG GATGGCATGG AGTTGGACGT GTTCAGCCTC GGCGGCAGAC GGACCGCCAA AATCGATGCC GACGGGGACG GGGTTGTGGA CGGAGGGATT AGGAACGGCA CGGATACGTA TGTGCTCGGC CAAGTCGAGC TTACCGCCCG GTTGCGAACC ATGCTGGGTC CGAACCGGTT CCTGCTGACG GACGGGGGAC TGGGCCAGCG TGCGAACACC GCGGATGTGA ACGGCGTCGA GCTCGAAGGG GTTCCAACGA CGGCCGATTT CGACATCTAC AAGTGGTCGC AGGCACTGTC GATTTTGAGG TTCTTCCAAA ACCACGGACG CTCTCCTGTT CTTTCCTACG GCATGTACAA GTTCACTCCC CCGTTCGATC CCCCGACCAG GTTTTCAGCT TTCAGGCTGG CCATGGCCGC GGCTCTTTTC TCGGACTCCG CATTCACCTT TTACGACGAA CCGGTCCCGG GGAGCACTCT GGGATTGAAG CCGGGTCCCG ATGCCGGTAA TTTCCCGGAC GTTTTCACCA TCTGGGATGA AGCGCGGGGG GGCAGCCTCG ATACCTACGG ATGGCTCGGA CGGCCCTTGC GTCCCGCCAT CCATCTGGCG GAAAAGCAGC CCGATCTTTA TGAAGGGGCC GGAGTCTCGA TAACCGACGA TTTCATTGCC GGTGTCAAAG GGGCGGCTGT GATCCAGCGG GTTTCCACCT CGACCGGCGC TCACCTCTGC CTGCAGGCCA AGACCGCCGA CCTGGAGGTC GAGTTGCCTC CCGTGTCCGT TCCCGGGCCT GACCTGGTGC TTGTGTTCGA TGCATATGCC GAACCCCTCG GAGAATTTCC CGTAACCCTG CCGCGCATCG TGACGGTGAC CGTCAAGATG TCGAACGGCT CCAAGCTCCC CATCCTCAAG GTGCCGGTCG ACAGGAGCTG GAATCACCTT GTCCTCTCGT TTCGCCCCTT GCCCTCGGGT TCCTCGACGT TCTGCATTTC CGCCGAAGGC ACGGAACGCC TCAGGCTTCG CCGGATAAAG GCTGTGGCGT TCCCCGACCT CATGTACCGG GAGTTCGAGG GCGGCGCGGT TTTCGCAAAC CCTTCCGACG CGCCTGCAAC TTTCGACTTG GGCGCGCTGT GTCCGACCGG GAGTTTCAGA CGGCTGTCCG GCAGCCCCGA TCAGGATCCC GCGACAAACG ACGGGAACCC TCTCGGTTCG ACGTTGACGC TCCCCGCACT CGACGCACTC GTGACCGTCC GTTCTTGA
|
Protein sequence | MPISIGRRQF LSTMSSLLAL VGLPFTGPPG ARAADVPLLQ ILRDRYPRVF AFRQAEVLAN LRDYSSWDTA LRPLAGVVGK LIPEERTDTV TERNIRYFRQ FKKRYPHKVT LLHLNGRSRL PTFETEGWYA GWWLYQAGTL MVESLTRSAT RISVSDIGRF ELEADGFGNL WEDLIITARK PNGKPNFAIV EHIRLVRINT AASALIVRRG QYGSIARAWP AGSYVAAHAT EGPYFPGGQK LWCYNLSTLS PRDSAGRHVI DAMIDGLQPR FASGGSLDFL DGMELDVFSL GGRRTAKIDA DGDGVVDGGI RNGTDTYVLG QVELTARLRT MLGPNRFLLT DGGLGQRANT ADVNGVELEG VPTTADFDIY KWSQALSILR FFQNHGRSPV LSYGMYKFTP PFDPPTRFSA FRLAMAAALF SDSAFTFYDE PVPGSTLGLK PGPDAGNFPD VFTIWDEARG GSLDTYGWLG RPLRPAIHLA EKQPDLYEGA GVSITDDFIA GVKGAAVIQR VSTSTGAHLC LQAKTADLEV ELPPVSVPGP DLVLVFDAYA EPLGEFPVTL PRIVTVTVKM SNGSKLPILK VPVDRSWNHL VLSFRPLPSG SSTFCISAEG TERLRLRRIK AVAFPDLMYR EFEGGAVFAN PSDAPATFDL GALCPTGSFR RLSGSPDQDP ATNDGNPLGS TLTLPALDAL VTVRS
|
| |