Gene Sfum_1652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1652 
Symbol 
ID4460057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2028192 
End bp2029259 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content58% 
IMG OID639702421 
Productresponse regulator receiver modulated CheB methylesterase 
Protein accessionYP_845774 
Protein GI116749087 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.379933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.345005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTAT TTTCCGATCA TACGCGCACT TCGCCTGTCA GGACTCTCGT CGTGGACGAC 
GCTCCCCTGA TGCGCAAGGT CATCCAGGAG ATATTGGCCA AGAATCGGGA CATCGAAGTC
GTGGGCACGG CGGTCCACGG CCAGGATTGC CTGGATAAGA TCCCGCAGCT CAAACCCGAA
GTCGTGACGC TCGACATCGA TATGCCGGTC ATGAACGGTA TCACGGCCGT CAAGAACATC
ATGGTCCGGC ACCAAATTCC GATCGTGATT ATCAGTTCCC TGGTCCAGGA CGGCTATTTT
GCTTTCGAAG CGTTGCGGCT CGGGGTCATG GATTTTCTTC CCAAACCGTC CAAGGTCGTG
AACACTGACT GGGCCAGCGA GGAGGAACTG GTCCGGATGC GCGTGCGCGC CGCCGCGGGA
ATGCAAGTGC ATCGCATGCG AAGAGTGCGC AGGCACAAGA AATCCCCGGT CATCACCGAT
CACCGTCAAA CGGCTCCTTC CTCGATCGTC GCCATGGGCA CGACATTGGC CGGTCCGAAC
ACGATCATGC ACATAGTGAC CCAGTTGAAT CCCGAGTTCA GCGGGGCAGT GGTGGCCCTG
CAGGAGATTC ACCCGCGGAT ATTGGTCCCT TTTTGTTCTT ATTTCAATGA GATCAGCCCG
CTCGAAGTGG TTCCGGTAAC CGATTCGGTC CCGCTCTGCC AGGGGAGGGT GTATCTCGGT
TCCACCTTTC TGGGCCTGCG GATCGGCACA TCCATCGAAA ACCCCGACGA GCTCATGGTC
TATGTGCCGC CGAACCCCGA GTTCCCCATC GATCAGCTCT TCGAGAGCGC GGCGTTTCAG
TACAAGCACG GTGCCTGTGC AGTGCTGCTG ACCGGAGTGG GCGTCGACGG CACGGAAGGC
ATGCGCGCAA TCAAGGAGCA AGGTGGTCTG ACGATAGCTC AGGACCACGA ATGCTGCGTT
TATCCGAATC TTGTGGAGAA TGCCCTCCAG CACAACGTGG TCGACGCGCT CATGACCAAC
AAAGGCATTG CCGGGCGCCT CGAATCGTGG CTTCAGGACA AGTTCTGA
 
Protein sequence
MNVFSDHTRT SPVRTLVVDD APLMRKVIQE ILAKNRDIEV VGTAVHGQDC LDKIPQLKPE 
VVTLDIDMPV MNGITAVKNI MVRHQIPIVI ISSLVQDGYF AFEALRLGVM DFLPKPSKVV
NTDWASEEEL VRMRVRAAAG MQVHRMRRVR RHKKSPVITD HRQTAPSSIV AMGTTLAGPN
TIMHIVTQLN PEFSGAVVAL QEIHPRILVP FCSYFNEISP LEVVPVTDSV PLCQGRVYLG
STFLGLRIGT SIENPDELMV YVPPNPEFPI DQLFESAAFQ YKHGACAVLL TGVGVDGTEG
MRAIKEQGGL TIAQDHECCV YPNLVENALQ HNVVDALMTN KGIAGRLESW LQDKF