Gene Sfum_1640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1640 
Symbol 
ID4460078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2012130 
End bp2013014 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content58% 
IMG OID639702409 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_845762 
Protein GI116749075 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000528528 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.017184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCAAAA AAATCGCAGT AATAGGCTTG ATGATCATCT GTGTCTCACT GGTGGCGCCC 
CTGTCCTATG CGCAGGAATT GAAGATAGGG GTTTTGGCCA ACCGTGGGGC AGCCAGAGCG
CTACGCGAAT GGAACGCCAC GGCCGAACAC CTTACAGCCG CCATCGGCAA GCCTTTCGTC
ATTCTCCCCT TGACTTACGA GCAACTTCCC GAATGGACCA AAGACAAGAA AATCGATTTC
GTCTGCGGCA ACCCGGCGAT GTTCGCCGAG ATGAACAAGC TGTACGGCGT GCAGGCGATC
GCGACGATCA TCAATCAATA CAAGGGCAAC CAGATGGACC AGATGGCCGG AACGATTCTG
GTCAGGCGGG ACAGTCCCAT CATGAGCGTG CAGGACATGA AGGGCAAGGA ATTCGGCACC
GCCGCGAAAA ATGCCTTCGG CGGCTGGCTG ATGACCGAGC GCGTGCTGGT GGAAGCCGGC
ATGAACCCGC GCCAGGATGT GGTCCTCCGG GAACTGCACA CGCACGACAA TGTCATTTAT
GCCATCATGA ACAAAGCCGT TGCCGCCGGG TCGGTTCGCT CCGGATCGCT TGAAAAGATG
CTCGATGAAG GAAAGGTCAA GCCGGAGGAT TTCAGGGTCA TCAATCAGCG CAATGACGGT
TTTCCTTTGC TGCATTCGAC CAGGCTCTAC CCCGAGTACC CAATGGGCGC CTGCGCGCAT
GTTCCGACTG CCCTGAGGGA GCAGGTGACA AAAGCGCTGG TCGCCATCGG GCCGAACGAC
CCCGCGGCCA AGAACGCGAA GATCGTGGGC TGGAAGGCCG CACTGGACTA TACGCCGGTG
GTCGAATGTC TCACCGTCGT TAAGTACGGT GCTTTTGGCC GGTGA
 
Protein sequence
MCKKIAVIGL MIICVSLVAP LSYAQELKIG VLANRGAARA LREWNATAEH LTAAIGKPFV 
ILPLTYEQLP EWTKDKKIDF VCGNPAMFAE MNKLYGVQAI ATIINQYKGN QMDQMAGTIL
VRRDSPIMSV QDMKGKEFGT AAKNAFGGWL MTERVLVEAG MNPRQDVVLR ELHTHDNVIY
AIMNKAVAAG SVRSGSLEKM LDEGKVKPED FRVINQRNDG FPLLHSTRLY PEYPMGACAH
VPTALREQVT KALVAIGPND PAAKNAKIVG WKAALDYTPV VECLTVVKYG AFGR