| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1627 |
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| Symbol | |
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| ID | 4460064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1992059 |
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| End bp | 1994704 |
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| Gene Length | 2646 bp |
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| Protein Length | 881 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639702396 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_845749 |
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| Protein GI | 116749062 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATGGG GAGGACGGTT TCTACCACGA CATCCTGCGA CTTCCCGACG GAGGCGCCAC
GAGCAAGTCT CTTCCGGCGT GCGTTTTTAC GATAATAGTG GTAAGTTTTC CAAACAGGTG
CCGGTTCCCG GTCCGGCATC AAACCCTCCT CGATTCCGCA AGAGAAAAGG AATCCTTATG
GCGAAGCATT CCTCAAGAGT GTTTTGGCTA TCCCTGATCG TCTCACTGGG TCTGTTTTTT
GTCGGCGCCC CTTTCCCGGC TGAAGGCAAA GACCCGCTGA CGCTCTTGCA GATGAAAGGC
GCCTCGAAGG CCCGGGAGAA ATCGGTAAAG GAACTGCCGG AGATTCCCGC CGACGCCGAC
CGCGACAGGA TCAATTCGAT CGTTGCGGGG CTTAGCGATG ATCAGGTTCG AAGGCTGCTG
CTGAAGGAAC TCGAGAAATC GTCCGCAGTC GCCGCGGGAA AACGGCAGAA GGAGGAGGTC
GACGGCGTCA GCGCCATCGT CAAGCGCGCC GAGGAAAACG TCATTTTGTT TCACCAGCGC
CTGAGCGAAC TCCGGGCAGG TGCGGTCGCC GTCCCGGAAT TCCTTCCTCA GACGTACTCG
AACCTGAGGG GCAAGGGAGG AACCGGGGAC ACCCTGCGTA TGTTCGCCGC GATCCTGATT
CTCCTTATCG GAGGTTTGGC CGCGGAGTGG CTCTTCGGGC GCTATACGGC CGGGATGCGA
AATCGGCTCG CGACCTCCCC GCCCGCTCAC TGGACGGTCA AGATCAAACG CCAGGTGGTT
TGCGCCGCGA TAGAAATTCT ATCCATCCTG GTTTTTTGCG TGGCGACCCT GACTTTGTTC
TTCCTCTTTT TCAACAGAGG GCAATTCGCC AGGCTGGTGC TTTTGACCTA CCTGGCCGCA
GTCCTGGTGG TGCGGGGGAC GCGCCTGGCG TTGCGCTTCC TCCTGGCGCC GGGAATCCCC
GAACTGAGGG TCCTGCCCGT GCAGGAACGC ACCGCCCGCT CCATTCACCG CTGGGTCATG
GGAATCGTCC TGGTCTCCGG CACGGGGTTT CTGCTCCGCG CTCTGTTGGA GCTACAGGGC
ATAACACAGG AGAGTATCCT TTTCATTCGA GCGACCACCG CCGGGATTGT CTTCTTCATG
CTGGCCTGCC TGGTTTTCGA CAACCGTGAA GCGGTCACCG GGTTCATCCA CCACAGATCC
GGGGACCACC CCGAGGGGGA CAGGCTGTTC CGAGGGCAAC TCGCGCAGTT CTGGCACCTG
CTCGCCATCC CATATTTTGT GGTGGTCTGG GCACTTTGGA TGTTTTACCT GCTCGTGGGC
CGGGCGGATT TGGTGATACC CATGCTCGCG CTCATTTCCA GTCTGCCGAT CTTCGTCATC
CTCGACAGAC TGGGACAAAG GCTCCTGAGT GCCATTTTCG GGCTTGTGGA CAAGATGGAA
GGGGGTGAGC AGGAGCCCGA GCCCGGGGCG ACCGCGGTTG CGGCGGCCGA TGGAGAGAAA
CCCCTAAAAG CGGCCGGTCG TGAAGGCCGC GCGGTCGCAT ACCACGTGGG CCGCCTGGTG
CCGGTGATCC GCCGCTGTTT GAGCCTTTCC ATAGCCGGGG TCATTGTTTT CTGGGTGTTG
CACCTGTGGG GGCTTGAAGT ACGGTTCGGC GAAGCCGTCA CGGGGGCCGC GCTGAAGGTC
CTCCTGGTGA TTTCACTTGC CTACGTTGCC TGGAGGCTGA TCGAGGGAGC CATAAACCGT
CGTCTCAAGA CGGTGCAGAC AGATTTCCCG GTGGATGAAG ATTCCGATTC GGGGGGCAAG
GGCGGCAGCC GGATCGGCAC CCTGCTTCAG CTCCTGCGCA AGTTCCTGCT CGTTGTGCTG
GTCCTGACGG TGGGCCTGAT CGTCCTGTCG GCGATCGGCA TCGACATTTC GCCACTCCTT
GCCGGCGCGG GAATCGTCGG CCTGGCGGTA GGTCTCGGGA CCCAGAATCT CATCAAGGAC
ATCGTGTCGG GCCTTTTCTT CCTCATCGAC GACGCCTTCC GCATCGGAGA CTACGTGGAA
TCGGGCAAGG CGAAAGGCAC CGTGGAGGCG ATCTCCATCC GCTCGCTGAA GCTTCGGGCC
ACGCGCGGCA TGGTGCACAA CGTGCCCTTC AGTCAACTGG GCATGGTGAC CAATTTCTCC
AGGGACTACA TCATCAGCAA ACTGGATGTC CCGGTTCCTC ACAGCACCGA TATCGACCGG
GTCCGCAAGG TCGTAAAGAA GATCAACAAG GAAATTGAAA AAGACGAGGA ACTCGGACCC
GCCCTGCTCA GCCCCATCAA ATCGGCAGGT GTGCGGGGTG TCAGCGACTC CGCCCTTAAC
ATGAGAATCA AGTTCAAGTC AAAACCGGGC ATGGAGTTCC TGATCCAGCG CCAGGTTCTC
AGGCGCCTTC AAGAGCTGTT TGCCGAGCAG GGTCTGGAGT TTGCCACGAG GCATGTCATG
GTGCGCCTGC CTGAAGACGC GTCCACCCGC AAGGGGGGCG ACAAAGGCCA GTCGAAGGAA
GGCGGCGAAG GTTCCCCCCG CAAGGACGTG CTGTCGGCCG CCGCAGGAGC GGCAATCGCG
GCCGTTTTGG CCGAGGAGGA GATCGCGAAG AAGAAACTGG AGTCCGAGGC TGAATCCGAG
TCCTGA
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| Protein sequence | MEWGGRFLPR HPATSRRRRH EQVSSGVRFY DNSGKFSKQV PVPGPASNPP RFRKRKGILM
AKHSSRVFWL SLIVSLGLFF VGAPFPAEGK DPLTLLQMKG ASKAREKSVK ELPEIPADAD
RDRINSIVAG LSDDQVRRLL LKELEKSSAV AAGKRQKEEV DGVSAIVKRA EENVILFHQR
LSELRAGAVA VPEFLPQTYS NLRGKGGTGD TLRMFAAILI LLIGGLAAEW LFGRYTAGMR
NRLATSPPAH WTVKIKRQVV CAAIEILSIL VFCVATLTLF FLFFNRGQFA RLVLLTYLAA
VLVVRGTRLA LRFLLAPGIP ELRVLPVQER TARSIHRWVM GIVLVSGTGF LLRALLELQG
ITQESILFIR ATTAGIVFFM LACLVFDNRE AVTGFIHHRS GDHPEGDRLF RGQLAQFWHL
LAIPYFVVVW ALWMFYLLVG RADLVIPMLA LISSLPIFVI LDRLGQRLLS AIFGLVDKME
GGEQEPEPGA TAVAAADGEK PLKAAGREGR AVAYHVGRLV PVIRRCLSLS IAGVIVFWVL
HLWGLEVRFG EAVTGAALKV LLVISLAYVA WRLIEGAINR RLKTVQTDFP VDEDSDSGGK
GGSRIGTLLQ LLRKFLLVVL VLTVGLIVLS AIGIDISPLL AGAGIVGLAV GLGTQNLIKD
IVSGLFFLID DAFRIGDYVE SGKAKGTVEA ISIRSLKLRA TRGMVHNVPF SQLGMVTNFS
RDYIISKLDV PVPHSTDIDR VRKVVKKINK EIEKDEELGP ALLSPIKSAG VRGVSDSALN
MRIKFKSKPG MEFLIQRQVL RRLQELFAEQ GLEFATRHVM VRLPEDASTR KGGDKGQSKE
GGEGSPRKDV LSAAAGAAIA AVLAEEEIAK KKLESEAESE S
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