Gene Sfum_1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1604 
Symbol 
ID4460104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1956271 
End bp1956543 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content60% 
IMG OID639702371 
ProductATP synthase F0, C subunit 
Protein accessionYP_845726 
Protein GI116749039 
COG category[C] Energy production and conversion 
COG ID[COG0636] F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 
TIGRFAM ID[TIGR01260] ATP synthase, F0 subunit c 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGTTCT TCGTTTACTC CGCTGTTGCC GCCGGTTTCG GCATCGCGAT CGCCGCTTTC 
GGTTGCGGTA TCGGCCAGGG CATGGCGGTT CGTGGCGCGG TCGAAGGCAT CGCCCGCAAT
CCCGAGGCTT CCGGCAAGGT TACGGTTACC ATGCTGATCG GTCTGGCCAT GATCGAGTCC
CTCTCGATCT ACGCCCTGGT TGTTTCTCTG ATCCTCATCT ACGCGAACCC CGTGTCCACC
GCGATGCAGG GTTTTGTGGG TCTGGGCAAA TAA
 
Protein sequence
MQFFVYSAVA AGFGIAIAAF GCGIGQGMAV RGAVEGIARN PEASGKVTVT MLIGLAMIES 
LSIYALVVSL ILIYANPVST AMQGFVGLGK