Gene Sfum_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1600 
Symbol 
ID4460100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1950520 
End bp1951434 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content59% 
IMG OID639702367 
Productquinolinate synthetase complex, A subunit 
Protein accessionYP_845722 
Protein GI116749035 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0379] Quinolinate synthase 
TIGRFAM ID[TIGR00550] quinolinate synthetase complex, A subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCA GCAAAGACAC CATTCGACGC ATTCAGGAAC TCAAACAGGA AAAGAAAGCC 
ATCATCCTTG CCCACAACTA CCAGCCGCCC GCCATTCAAG ACGTGGCGGA CCTCACGGGC
GATTCGCTCG AGCTCAGCAG GCATGCCTCC GCCACCGAAG CCGCGGTCAT TGTTTTCTGC
GGAGTGGGTT TCATGGCTGA GACGGCGGCG ATACTCAATC CGGGCAAAAT CGTCCTCCTG
CCGAACCCCC GGGCCGGATG TCCCATGGCC GACATGATCA CCCCGGGGAA CGTGAAGGAT
ATCCGAAGGC AATACCCCGG GGTACCGATC ATCACTTATG TCAATTCCAC GGCCGCCGTG
AAAGCGGAGA GCACCGTCTG CTGCACTTCA TCGAACTGCA TCCGCGTCGC CCAATCGTTC
AAGGACGCAG ATACGCTCTA CATGGCCCCG GATCAGAACC TCGCCATGTA TACCGCCCGC
CATACGGGTA AGACGATCCA TTACTGGGAG GGTTATTGCC CGATTCACCA CAAGCTCACC
GCCGAGCAAG TCCGCAAACG GAAGGCCGAG CATCCGGAAG CCCTGTTCAT CGCTCATCCC
GAATGCCGCC CGGAAGTCCT GGAACTGGCT GACCTGGTGC ACAGCACCTC CGGTATGCTT
CGGTTCGTGA GCGAAAGCAG CGAGTCGTCG TTCATCATCG GCACGGAAAC GGGCATCTTG
TATCCCATGC AGAAGAGGAA CCCGGAAAAG CGCCTCTATC CCGCATCCAA TACGATGGTG
TGCCCGGACA TGAAGAAGAC GAGCCTCGAG GACGTGCTGC GCTCGATGGA GACGATGGAG
CCCCGGATCA CCGTGCCCGA GGATATCCGC CTCCGGGCGC TGGAAGCCGT GGAGCGTATG
CTCGCCATCC GTTGA
 
Protein sequence
MNVSKDTIRR IQELKQEKKA IILAHNYQPP AIQDVADLTG DSLELSRHAS ATEAAVIVFC 
GVGFMAETAA ILNPGKIVLL PNPRAGCPMA DMITPGNVKD IRRQYPGVPI ITYVNSTAAV
KAESTVCCTS SNCIRVAQSF KDADTLYMAP DQNLAMYTAR HTGKTIHYWE GYCPIHHKLT
AEQVRKRKAE HPEALFIAHP ECRPEVLELA DLVHSTSGML RFVSESSESS FIIGTETGIL
YPMQKRNPEK RLYPASNTMV CPDMKKTSLE DVLRSMETME PRITVPEDIR LRALEAVERM
LAIR