Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1581 |
Symbol | |
ID | 4460116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 1930858 |
End bp | 1931484 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639702348 |
Product | ribosomal protein S4 |
Protein accession | YP_845703 |
Protein GI | 116749016 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.075327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTCGCT ATACGGACTC ATCTTGTCGG ATCTGTCGAC GAGAAACCAT GAAGCTCTAT TTGAAAGGCG ACCGTTGTTA TTCTGACAAG TGCGCCGTCG AACGCCGCAA CTATCCTCCC GGTCAGCATG GTCAGGGGAG GGGCAAGTTC TCCGACTACG GGCTTCAGTT GCGCGAAAAG CAGAAGATCA GGCGTATGTA CGGCCTTGTT GAAAAGCAGT TCAAGACCTA CTTCAAGCAC GCGGACCGGC AGAAAGGGGT CACCGGGACC AACTTCCTGA CCCTCTTGGA AAGGCGAATC GACAACACGG TGTATCGACT CGGATTCGCA AGCTCCCGTG CTCAGGCGAG GCAGCTTGTT CGGCACAGCC ATTTTCTGGT GAACGGCAAG AAGGTCAACA TTCCTTCTTT CCTGCTTCGT CCCGGCGATT CGGTGAGTGT CGTCGAAGGC AGCCGGCAGT TGCAGATGAT CAATGAAGCC ATGGAAGCCA TGCCCCGTCG AGGGCTTCCG CCCTGGTTGG AACTTGATAA GGCGAAGTAT GAGGGCGTAT TCAAGACCCT CCCGACCAGA GAAGAGATGA ATCTGCCCGT GCAGGAGCAA CTGGTCGTCG AATTCTATTC GAAGTAA
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Protein sequence | MARYTDSSCR ICRRETMKLY LKGDRCYSDK CAVERRNYPP GQHGQGRGKF SDYGLQLREK QKIRRMYGLV EKQFKTYFKH ADRQKGVTGT NFLTLLERRI DNTVYRLGFA SSRAQARQLV RHSHFLVNGK KVNIPSFLLR PGDSVSVVEG SRQLQMINEA MEAMPRRGLP PWLELDKAKY EGVFKTLPTR EEMNLPVQEQ LVVEFYSK
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