Gene Sfum_1581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1581 
Symbol 
ID4460116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1930858 
End bp1931484 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content55% 
IMG OID639702348 
Productribosomal protein S4 
Protein accessionYP_845703 
Protein GI116749016 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0522] Ribosomal protein S4 and related proteins 
TIGRFAM ID[TIGR01017] ribosomal protein S4, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.075327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTCGCT ATACGGACTC ATCTTGTCGG ATCTGTCGAC GAGAAACCAT GAAGCTCTAT 
TTGAAAGGCG ACCGTTGTTA TTCTGACAAG TGCGCCGTCG AACGCCGCAA CTATCCTCCC
GGTCAGCATG GTCAGGGGAG GGGCAAGTTC TCCGACTACG GGCTTCAGTT GCGCGAAAAG
CAGAAGATCA GGCGTATGTA CGGCCTTGTT GAAAAGCAGT TCAAGACCTA CTTCAAGCAC
GCGGACCGGC AGAAAGGGGT CACCGGGACC AACTTCCTGA CCCTCTTGGA AAGGCGAATC
GACAACACGG TGTATCGACT CGGATTCGCA AGCTCCCGTG CTCAGGCGAG GCAGCTTGTT
CGGCACAGCC ATTTTCTGGT GAACGGCAAG AAGGTCAACA TTCCTTCTTT CCTGCTTCGT
CCCGGCGATT CGGTGAGTGT CGTCGAAGGC AGCCGGCAGT TGCAGATGAT CAATGAAGCC
ATGGAAGCCA TGCCCCGTCG AGGGCTTCCG CCCTGGTTGG AACTTGATAA GGCGAAGTAT
GAGGGCGTAT TCAAGACCCT CCCGACCAGA GAAGAGATGA ATCTGCCCGT GCAGGAGCAA
CTGGTCGTCG AATTCTATTC GAAGTAA
 
Protein sequence
MARYTDSSCR ICRRETMKLY LKGDRCYSDK CAVERRNYPP GQHGQGRGKF SDYGLQLREK 
QKIRRMYGLV EKQFKTYFKH ADRQKGVTGT NFLTLLERRI DNTVYRLGFA SSRAQARQLV
RHSHFLVNGK KVNIPSFLLR PGDSVSVVEG SRQLQMINEA MEAMPRRGLP PWLELDKAKY
EGVFKTLPTR EEMNLPVQEQ LVVEFYSK