Gene Sfum_1577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1577 
Symbol 
ID4460147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1928787 
End bp1929533 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content59% 
IMG OID639702344 
Productmethionine aminopeptidase, type I 
Protein accessionYP_845699 
Protein GI116749012 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00040265 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCGTAC TGAGATCTCA GCGGGAGATC GAAAAGATCA GAACGGCATG CAAGATAGTG 
GCTGAGATCC TCCAACACCT GAAGGAACAT GTTCGGCCGG GGGCCACGAC ATGGGACTTG
AACGCCTTGA GTGAGGATTT GGCGGCCAGG AAGAAGGCTG TGCCTGCATT CAAGGGGTAC
CAGGGTTATC CTTTCGCCTT GTGCACTTCG ATCAACTGCG AGGTGGTTCA CGGGATGCCG
TCCCGGCAGC GGCATCTTGC GGAGGGCGAC ATCATCAGCA TCGATTTCGG GGTCGTCCAC
GACGGGTATT ACGGCGATGC CGCGGTGACG GTGGCCGTGG GAACCATCAG TCAGGAGGCC
GAGCGATTGT GCACGGTGAC TGAGGAGTCG CTCTATGCGG GAATCCGACA GGCGATAGCA
GGCAACCGCC TGTCGGACAT CTCTCATGCG ATTCAGGAAT ACGTGGAGAC ACGGGGATTT
TCGGTGGTGC GTGAGTTCGT GGGGCACGGC ATCGGTCAGA ATCTGCACGA GAGTCCGCAG
ATTCCCAACT ATGGGCCTCC GGGCAAGGGG GTACAGTTGA AGTCGGGGAT GGTGTTGGCG
ATCGAACCGA TGATCAACGC GGGATGCCCG GACGTGGAGA TATTGCGGGA CAAGTGGACG
GCGGTGACGC TGGACCGGAA GTTGTCGGCG CATTTCGAGC ACACGATTGT GATCACGGAC
AACGGGCCCG AGATCCTCAC TCAATAG
 
Protein sequence
MIVLRSQREI EKIRTACKIV AEILQHLKEH VRPGATTWDL NALSEDLAAR KKAVPAFKGY 
QGYPFALCTS INCEVVHGMP SRQRHLAEGD IISIDFGVVH DGYYGDAAVT VAVGTISQEA
ERLCTVTEES LYAGIRQAIA GNRLSDISHA IQEYVETRGF SVVREFVGHG IGQNLHESPQ
IPNYGPPGKG VQLKSGMVLA IEPMINAGCP DVEILRDKWT AVTLDRKLSA HFEHTIVITD
NGPEILTQ