| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1573 |
|---|
| Symbol | rpmD |
|---|
| ID | 4460143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 1926041 |
|---|
| End bp | 1926223 |
|---|
| Gene Length | 183 bp |
|---|
| Protein Length | 60 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639702340 |
|---|
| Product | 50S ribosomal protein L30 |
|---|
| Protein accession | YP_845695 |
|---|
| Protein GI | 116749008 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1841] Ribosomal protein L30/L7E |
|---|
| TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0153728 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGT CTATCCAGGT CAAATTGGTT CGAAGCCCCA TCGGCCGCCC TGAGAAACAC
CGCAAGGTGC TCCAGGCCCT GGGGCTCACA CGACTCAACA AGACGGTGAA CCTTCATGCC
ACCCCTGCCG TCGCCGGGGC CGTGAAGAAG GTGATCCACA TGGTTGAAGT CAAGGAGCTT
TAG
|
|---|
| Protein sequence | MAKSIQVKLV RSPIGRPEKH RKVLQALGLT RLNKTVNLHA TPAVAGAVKK VIHMVEVKEL
|
|---|
| |