Gene Sfum_1572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1572 
Symbol 
ID4460142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1925447 
End bp1925947 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content60% 
IMG OID639702339 
Productribosomal protein S5 
Protein accessionYP_845694 
Protein GI116749007 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0532593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATAGCTT TGGAATCAAG CCAACTGCAA CTGATAGACA AAGTGGTCCA CATCAGCAGA 
GTGGCCAAGG TGGTCAAAGG TGGCCGTCGT TTCTCGTTCA GTGCCATAGT GGTCGTCGGT
GACGGCAACG GCCGGGTCGG GTTCAGCCTT GGCAAGGCCA ATGAAGTGCC GGAAGCCATT
CGCAAGGGCA TGGAATCCGC CAAGCGCACC ATGTTCGAAG TGCCGCTGGT CAACGCCACC
ATCCCGCATG AGGTGCTCGG GCGTTTTGGA GCCGCTTCGG TGGTGCTCAA GCCGGCCTCG
GCGGGCACGG GGGTGATTGC AGGGGGCGCG GTCCGTGCCA TCATGGAAGC GGCGGGCATT
CACAATATTT TGACCAAGTG CATCGGATCG AGGAACCCTC ATAACGTCGT CAAGGCCACG
CTCGAGGGTC TGCGCCGGCT CCGCAACGTG GAACTGGTCG CAAAGCTGCG CGGGCGTGAA
GTGCACGAGA TTCGAGATTA G
 
Protein sequence
MIALESSQLQ LIDKVVHISR VAKVVKGGRR FSFSAIVVVG DGNGRVGFSL GKANEVPEAI 
RKGMESAKRT MFEVPLVNAT IPHEVLGRFG AASVVLKPAS AGTGVIAGGA VRAIMEAAGI
HNILTKCIGS RNPHNVVKAT LEGLRRLRNV ELVAKLRGRE VHEIRD