Gene Sfum_1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1570 
Symbol 
ID4460140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1924483 
End bp1925022 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content59% 
IMG OID639702337 
Productribosomal protein L6 
Protein accessionYP_845692 
Protein GI116749005 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.362443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGCG TGGGAAAACT GCCCATCACC ATACCCAAGG GAGTCGATGT TTCCCTGGAT 
GAACCTTTGT TGACGATCAA GGGTCCAAAG GGTACCCTGG CCCGCCGGAT GCCCGGCGAC
GTCGAGGTCC ACCTGGAACA GGGTGCCGTC TTGATCAGGC GCAAGGACGA GTCCAATAAG
TCTCGTTCGC TTCACGGATT GGTGAGAGCA CTGGTGAACA ACATGGTGCA CGGTGTCAGC
GAGGGTTTCG TGATCTCTCT CGAAATCCAG GGGACCGGTT ACCGTGCCGA CGCTCAGAAC
AATGTGCTGA ACCTGAGCCT CGGGTATTCA CACCCGATCC AGTTCGTCCT GCCGGAAGGC
ATCAAGGGCG CCGTCGATCG CAACACCATT CGGCTCGAAG GAATCGATAA AGAGCTGCTC
GGCCAGACGG CCGCCCGCAT TCGCGCTCTT CGCCCCGCCG AACCTTACAA AGGCAAGGGC
ATTCGTTATG CGGGCGAGCA CATTCACCGC AAGGTCGGCA AGACCGGCTC CAAGAAGTAA
 
Protein sequence
MSRVGKLPIT IPKGVDVSLD EPLLTIKGPK GTLARRMPGD VEVHLEQGAV LIRRKDESNK 
SRSLHGLVRA LVNNMVHGVS EGFVISLEIQ GTGYRADAQN NVLNLSLGYS HPIQFVLPEG
IKGAVDRNTI RLEGIDKELL GQTAARIRAL RPAEPYKGKG IRYAGEHIHR KVGKTGSKK