| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1567 |
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| Symbol | rplE |
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| ID | 4460137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1923249 |
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| End bp | 1923788 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639702334 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_845689 |
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| Protein GI | 116749002 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGAC TGCGGGAAAC ATACCGGAAC GAGATAGCTC CCAAGCTTTC CGAACAGTTC
AAGTACAAGA GCCCGATGCA GATACCCAGG TTGAGCAAGA TCATCCTGAA CATGGGTTTG
GGCGATGCGA TTCAGAACAT CAAGATACTG GACTCCGCGG CCGAGGAGCT CGGCATGATC
AGCGGTCAGA AGCCCGTGAT CACGAGAGCC CGTCAGAGCA TCGCCGCGTT CAAGCTTCGC
AAGGGAATGC CCATCGGCTG CATGGTTACC CTGAGAGGGG ACCGGATGTA CGAGTTTTTC
GATAAGCTGG TGAATGTCGC CCTGCCCCGC GTTCGTGACT TCCGGGGAGT TTCTTCGCGA
GCCCTCGATG GCCGCGGGAA CTACACCCTC GGCATCAAGG AACATATCAT TTTCCCGGAA
ATCGACTACG ACAAGATCGA TAAGATCAAA GGCATGAACA TCACCATCGT GACGACGGCA
AAGAACGACG ACGAAGCGCG AACGCTTCTG GCGTTGATGG GCATGCCGTT CAAACAGTAG
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| Protein sequence | MARLRETYRN EIAPKLSEQF KYKSPMQIPR LSKIILNMGL GDAIQNIKIL DSAAEELGMI
SGQKPVITRA RQSIAAFKLR KGMPIGCMVT LRGDRMYEFF DKLVNVALPR VRDFRGVSSR
ALDGRGNYTL GIKEHIIFPE IDYDKIDKIK GMNITIVTTA KNDDEARTLL ALMGMPFKQ
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