Gene Sfum_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1560 
Symbol 
ID4461105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1920354 
End bp1920686 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content58% 
IMG OID639702327 
Productribosomal protein L22 
Protein accessionYP_845682 
Protein GI116748995 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0091] Ribosomal protein L22 
TIGRFAM ID[TIGR01044] ribosomal protein L22, bacterial type 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.671944 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.997362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTCA GAGCCGTGAG CAAGTTCTTG CGTGTCTCGC CGCATAAGGC TCGCCTGGTC 
GCGGACCTGG TTCGCGGGAA GAAGGTCAGC GATGCCTTGA CTATCCTCAA GTTCACGCCC
AAGAAAAGCG GCCGGTTCAT CAACAAGACG TTGCGCTCGG CGGTGGCCAA CGCCGAGAAT
ACCAAGTCGA TGGACGTGGA GACCCTTTTC GTCAAGTCCA TTTTCGTCGA CAAAGGCCCG
CAGCTCAAGC GCTGGCGGCC GCGTGCGATG GGGCGTGCGA CCAAGATCCT GAAGGGGTCG
AGTCACATTA CGATCATACT GGCTGAGAAA TAG
 
Protein sequence
MEVRAVSKFL RVSPHKARLV ADLVRGKKVS DALTILKFTP KKSGRFINKT LRSAVANAEN 
TKSMDVETLF VKSIFVDKGP QLKRWRPRAM GRATKILKGS SHITIILAEK