| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1551 |
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| Symbol | rpsL |
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| ID | 4461096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1914615 |
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| End bp | 1914986 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639702318 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_845673 |
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| Protein GI | 116748986 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00133332 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.90394 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCACAA TCAACCAGTT GGTTCGAAAA GGCAGAGAAG AGATTCGGAA GAAATCGAGC
ACCCCCGCCC TTCAGTGCTG TCCGCAAAAG CGGGGAGTGT GTGTGCGCGT TTACACGACC
ACGCCGAAGA AGCCCAATTC GGCTTTGCGC AAGATCGCGC GCGTGCGCCT GACCAACGGC
ATCGAGGTGA CGTCCTATAT CCCCGGTATC GGGCACAATC TGCAGGAACA CTCGGTGGTG
CTGATCAGGG GGGGGCGTGT GAAGGATCTG CCGGGCGTAC GCTATCATAT CATCCGCGGC
ACTCTGGACG CGCTTGGGGT GGCTGACCGA AAGCAGGGAC GCTCCAAGTA CGGCACCAAG
AGGCCGAAGT AA
|
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| Protein sequence | MPTINQLVRK GREEIRKKSS TPALQCCPQK RGVCVRVYTT TPKKPNSALR KIARVRLTNG
IEVTSYIPGI GHNLQEHSVV LIRGGRVKDL PGVRYHIIRG TLDALGVADR KQGRSKYGTK
RPK
|
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