| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1549 |
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| Symbol | |
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| ID | 4461094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1906074 |
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| End bp | 1910186 |
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| Gene Length | 4113 bp |
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| Protein Length | 1370 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639702316 |
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| Product | DNA-directed RNA polymerase, beta subunit |
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| Protein accession | YP_845671 |
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| Protein GI | 116748984 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.937608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTACGG CTTTGACCCA TGAATACCGG GTGCGAAAGA ATTTTGGCAA GATCCACAAA
ATCATCGACA TCCCCAATCT CATCCAGATG CAGAAGGAAA GCTACGAGTT GTTTCTGCAG
AGGGATGTCC CGTCGGAAGC CAGGAGCGAG CGCGGTCTGC AGGAGGTATT CAAGAGCGTT
TTCCCCATCG AGGACTTCAG CGGAACGGCT TCCCTGGAAT TCGTGCAGTA CAGTTTCGGC
GAGGTCAAGT ATGAGGTGGA AGAGTGCCTT GCCCGGGGCA TGACCTACGA AGCCCCGGTG
AAGATCGTCG TCCGCCTGGT CGTCTACGAT GTGGATAAGG AAGCGGGAAC CCGGTCCATA
AGGGACATCA AGGAGCAGGA AATCTACTTC GGCACCCTCC CCCTGATGAC CGACAACGGG
ACTTTCATCA TCAACGGCAC CGAACGCGTC ATCGTCAGCC AGTTGCACCG GTCTCCCGGT
ATTTTTTTTG ACCATGATCG CGGGAAGACC CACTCCAGTG GAAAGATCCT GTATTCCGCG
CGCATCATCC CCCTGCGCGG CTCCTGGCTC GACCTCGAAT TCGACCCGAA AGACATTCTG
TACATCCGGA TCGATCGACG CCGCAAGTTT CCGGTCACCG TTCTCCTCAA AGCTCTCGGA
TATGCCACGG AAGAACTGCT CAACTACTTC TATCCCAGCG AAAAGATCTT TTTGAAAAGC
GAGGCCCAGT CGGAGAAGGA ATTGAACCCC GATATTCTGA TGGGAAGCCG CGCCCCGGAA
GACATCCTGC ATCCGCAAAC CGGCGAAGTG TTGATCAAGA AGAACAGGAA GCTCGGCAAG
CAGGCCCTCC GGCGGCTCCA GGAAGTGGGC ATCAACCGTT TGCCCATGAA GAGCACCGAA
CTGATCGGCC AGGTGCTCGC CCAGGATGTG ATCGACTACG GCACGGGCGA AATCGTCGCC
GAGTGCAACG ACAGCATCGA CGCGGACATG CTCAAGGAAT TCGTGGAGCG CGGCGTTGGA
GAGATCGAGC TCCTGCACCT GGAGGGACAG GACGTCAGCC CGTCGTTCCG CAACACGCTC
CTGATGGACA AGGTCAACAC GCAGGAAGAC GCCCTGATCG AAATCTATCG GAGGCTGCGG
CCCAGCAATC CGCCCACTCT CGAAGTGGCG ACCGAATTCT TCAACAACCT CTTTTTCAAC
CCCGACCACT ACGATCTGTC GGAAGTCGGC CGCCTCAAGC TCAACCTGCA GCTTGGCCTG
GAAGTGCCGC TCGACTACCG GACTCTGCGC AAGGACGATA TCCTGATGGC GGTCCGCCAG
CTCATCCGGC TCAAAGACTC ACAGGGGCCC GTCGACGACA TCGACAACCT TGGCAACCGG
AGAGTGCGCG CCGTCGGCGA ATTGCTCGAG AATCAGTACC GGATCGGACT TGTGCGCATG
GAGCGCGCCA TAAAGGAACG CATGACGCTC CAGGAAGTCG AGGCGCTCAT GCCGCACGAC
CTCATCAACG CCAAACCGGT ATCGGCGGTG GTGAAGGAGT TTTTCGGCAC CAGCCAGCTC
TCGCAGTTCA TGGACCAGAC GAACCCTCTT TCCGAAATCA CGCACAAGCG ACGCCTGAGC
GCGCTCGGCC CGGGGGGCCT CACCCGGGAG CGGGCCGGAT TCGAGGTCCG GGACGTTCAT
CCCACGCATT ACGGCCGGAT TTGCCCCATC GAAACCCCGG AAGGTCCGAA CATCGGTCTC
ATCGTTTCGC TGTCGACTTA CGCCAGGGTG AATCCTTACG GGTTCATCGA AACGCCCTAT
CGGAAGGTTG ACGGGTCGAG CGCCCGGAAG GATGTGAGCT ATCTGACGGC CATGGACGAG
AAGGAGTACC CCATCGCCCA GGCCAACGCG CCCCTGGACG AAAAGGGACG CTTTCTGCTC
GACCTGGTGT CCGCGCGGGT GGCGGGCGAG CCCGTGATGG TCCCGCCCAA TGAAATCCGT
TACATGGACG TATCCCCCAA CCAGCTGGTG AGTGTTTCCG CATCCCTGAT CCCGTTTCTG
GAGCACGATG ACGCCAACCG CGCCCTCATG GGCTCCAACA TGCAGCGCCA GGCGGTCCCT
CTCATTCAGA CCCGCGCTCC TCTGGTCGGC ACCGGGATCG AACGGATCGT GGCCAAGGAC
AGCGGCGTGG CCATCGTTGC CAGGCGAACC GGAGTCGTGG AATACGTGGA CGCCACCCGG
ATCGTCATTC GAGCCATCGA GGATAACGGG GAGATGGGCA GTGGAGTGGA CATCTACAAG
CTCATCAAGT TTCAGAGATC GAACCAGAAC ACCTGCATCA ACCAGAAACC GCTGGTGCAG
CACGGTGACC TGGTGACAAA GGGTCAGATC ATCGCCGACG GCCCTTCGAC CGACCACGGC
GAACTGGCAC TCGGAAGAAA CGTGATGGTC GCGTTCATGA GCTGGGGAGG GTACAACTTC
GAGGATTCGA TCCTGGTGAG CGAGAGGATC GGCAAGGAAG ACGTGTTCAC ATCGATTCAC
ATCGAAGAAT TTGAAGTGGT GGCTCGGGAC ACGAAGTTGG GCAAGGAGGA CATCACGCGC
GACATTCCCA ACGTCGGCGA GGAGGCGCTG AAGAACCTCG ACGAAAGCGG CATCATCCGC
GTGGGAGCTT ACATCAAGCC CAACGACATC CTGGTGGGCA AAGTGACTCC CAAGGGCGAG
TCGCAGCTGA CCCCGGAGGA AAAGCTCCTG CGGGCCATTT TCGGCGAGAA GGCGAGCGAC
GTGAAAGACA CGTCGTTGCG CGTACCGCCC GGGGTCGAGG GGATCATCAT CGACGCCAAG
GTGTTTTCGC GCAAGGGCGT GGAGAAGGAC GAGCGCACGA AGACCATCGA GGACCAGGAA
ATCTCCCGCC TGATGAAAGA TCAGCGCGAT GAGCTGGAGA TCATCTTCAA GTCGACGGTC
AAGCGGCTGG CAAAGCTCCT GGAAAACCAG GTGAGCGACA GCGCCATAAA GGACGGGAAG
AAAGTCTACA TCAAGAAGGG CGAGGTCTTC ACCGAGGAGA TTCTGCTGAA CCTGCCCAGC
GGACACTGGG ATCAATTGAC GGTCGCCAAG GATCCGACCG TGTCCATGGA AATCGAGAAC
ATTCTCGCCA ACTACCGGGA ACAGGTTCAG TTGGTGAAAT CGTTGTTCGA AGAAAAGATC
GGCAAGCTCA AACGCGGAGA CGAGCTGCCT CCCGGCGTCA TCAAGATGGT CAAGGTTTAT
GTCGCCGTCA AACGGAAGCT CCAGGTCGGA GACAAGATGG CCGGCCGCCA CGGAAACAAG
GGCGTGGTCT CGAGGATTCT CCCGGCCGAG GATATGCCTT ACTTCCCCGA CGGAACGCCG
GTCGACATCG TTTTGAATCC TCTTGGCGTG CCCTCCCGTA TGAACGTGGG CCAGGTGCTG
GAAACCCACA TCGGATGGGC CGCGAAGGGA ATCGGGATGC AGCTGGCTCA GATGCTCGAG
GAATGCAGGG AGCGGGAAAC GATGAACGAA AAGCTCCAGC GTATTTACAA CAAGCTGGAG
TTCGGAACCT ACTTCAAAGA CGCATCGGAG CGGGAGCTCA GAGGGCTCAT TCCCGACTTC
AAGGAAGGCA TACATGTCGC CTCCCCGGTT TTCGACGGCG CGGAAGAGGC TGAGATCCGA
GCGTTCCTGA GTGAGGCCGG GGTGTCGGAA ACCGGGCAAT CAGTCCTCTA CGACGGCAGA
ACGGGCATGC CTTTCGACCA GCCGGTCACG GTGGGCGTGA TGTACATGCT CAAGCTGCAT
CACCTGGTGG ACGACAAGAT CCACGCGCGA TCCATCGGCC CCTATTCTCT CGTGACCCAG
CAGCCTCTGG GAGGCAAGGC GCAGTTCGGC GGGCAGCGGC TGGGCGAAAT GGAAGTCTGG
ACCATGGAAG CCTACGGCGC CGCCTATGCG CTCCAGGAAT TCCTGACGGT CAAGTCTGAC
GACGTGGCCG GCCGCACGCG CATGTACGAG AAAATCGTGA AGGGGGATAA CACTCTCGAA
GCCGGGCTGC CCGAATCTTT CAACGTTCTG GTTAAGGAGC TTCAGGCCCT CGCCCTGGAC
GTGCGGCTCC TGGAAGAAGA GGAAGGCAAT TGA
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| Protein sequence | MPTALTHEYR VRKNFGKIHK IIDIPNLIQM QKESYELFLQ RDVPSEARSE RGLQEVFKSV
FPIEDFSGTA SLEFVQYSFG EVKYEVEECL ARGMTYEAPV KIVVRLVVYD VDKEAGTRSI
RDIKEQEIYF GTLPLMTDNG TFIINGTERV IVSQLHRSPG IFFDHDRGKT HSSGKILYSA
RIIPLRGSWL DLEFDPKDIL YIRIDRRRKF PVTVLLKALG YATEELLNYF YPSEKIFLKS
EAQSEKELNP DILMGSRAPE DILHPQTGEV LIKKNRKLGK QALRRLQEVG INRLPMKSTE
LIGQVLAQDV IDYGTGEIVA ECNDSIDADM LKEFVERGVG EIELLHLEGQ DVSPSFRNTL
LMDKVNTQED ALIEIYRRLR PSNPPTLEVA TEFFNNLFFN PDHYDLSEVG RLKLNLQLGL
EVPLDYRTLR KDDILMAVRQ LIRLKDSQGP VDDIDNLGNR RVRAVGELLE NQYRIGLVRM
ERAIKERMTL QEVEALMPHD LINAKPVSAV VKEFFGTSQL SQFMDQTNPL SEITHKRRLS
ALGPGGLTRE RAGFEVRDVH PTHYGRICPI ETPEGPNIGL IVSLSTYARV NPYGFIETPY
RKVDGSSARK DVSYLTAMDE KEYPIAQANA PLDEKGRFLL DLVSARVAGE PVMVPPNEIR
YMDVSPNQLV SVSASLIPFL EHDDANRALM GSNMQRQAVP LIQTRAPLVG TGIERIVAKD
SGVAIVARRT GVVEYVDATR IVIRAIEDNG EMGSGVDIYK LIKFQRSNQN TCINQKPLVQ
HGDLVTKGQI IADGPSTDHG ELALGRNVMV AFMSWGGYNF EDSILVSERI GKEDVFTSIH
IEEFEVVARD TKLGKEDITR DIPNVGEEAL KNLDESGIIR VGAYIKPNDI LVGKVTPKGE
SQLTPEEKLL RAIFGEKASD VKDTSLRVPP GVEGIIIDAK VFSRKGVEKD ERTKTIEDQE
ISRLMKDQRD ELEIIFKSTV KRLAKLLENQ VSDSAIKDGK KVYIKKGEVF TEEILLNLPS
GHWDQLTVAK DPTVSMEIEN ILANYREQVQ LVKSLFEEKI GKLKRGDELP PGVIKMVKVY
VAVKRKLQVG DKMAGRHGNK GVVSRILPAE DMPYFPDGTP VDIVLNPLGV PSRMNVGQVL
ETHIGWAAKG IGMQLAQMLE ECRERETMNE KLQRIYNKLE FGTYFKDASE RELRGLIPDF
KEGIHVASPV FDGAEEAEIR AFLSEAGVSE TGQSVLYDGR TGMPFDQPVT VGVMYMLKLH
HLVDDKIHAR SIGPYSLVTQ QPLGGKAQFG GQRLGEMEVW TMEAYGAAYA LQEFLTVKSD
DVAGRTRMYE KIVKGDNTLE AGLPESFNVL VKELQALALD VRLLEEEEGN
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