Gene Sfum_1543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1543 
Symbol 
ID4460629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1902531 
End bp1902878 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content58% 
IMG OID639702310 
Productpreprotein translocase, SecE subunit 
Protein accessionYP_845665 
Protein GI116748978 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0690] Preprotein translocase subunit SecE 
TIGRFAM ID[TIGR00964] preprotein translocase, SecE subunit, bacterial 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.273014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.520418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGC CGAAGCTATT CACGAAGAAG AATGAAGCGG AGCGATCCGC GAAATCACCG 
AAGGCCGAAA GCTCCAGGAA GGCAAGTCTC AGGGCGGTCA AACCGAAGAA GACCGAAACC
TCCAAGCGTC CCTCCAGGAA ACCGGAGGAA TCGCGACTCG CCTGGTGGCA TGCTTCCCGA
CAGTATCTTC GGGAAGTGGT TTCCGAGCTG AAAAAGGTCG TCTGGCCGTC CCGGAAGGAG
ACCGTCGGTT CCACCGCCGT GGTGCTGGTG ATCGTTGCCG TTTGCGGCGT TTTCCTGGGA
ATCGTAGACC AGGTTCTGAG CCTTCTGGTC CGCATGCTCA TCGGCTGA
 
Protein sequence
MNLPKLFTKK NEAERSAKSP KAESSRKASL RAVKPKKTET SKRPSRKPEE SRLAWWHASR 
QYLREVVSEL KKVVWPSRKE TVGSTAVVLV IVAVCGVFLG IVDQVLSLLV RMLIG