Gene Sfum_1529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1529 
Symbol 
ID4460614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1888474 
End bp1889985 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content62% 
IMG OID639702295 
Productsodium/hydrogen exchanger 
Protein accessionYP_845652 
Protein GI116748965 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.842415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTCA GCATCGGGTT GATCATTCTC ATGGGACTGG CCGCGGATCT GGTGTTTCGT 
CGCCTGAAAC TGCCGGGCTT CATGGGCATG CTGCTGGTCG GCATGACGGT GGGTCCTCAC
GGCCTGGATC TGATGGCTCC GGAAATGGTC GGCGTTTCCG AGGATTTTCG AGAGATCGCC
CTCGTTGTCC TTCTCCTCCG CGCAGGACTC GGGCTCAACC GTTCGACGCT GCGCAGAGTG
GGGGCACTCA CCATCGGCAT GAGCTGCCTG CCCAACCTTT TCGAGCTGGC GGCGGTTGTT
GTGACGGCCC ATTGGCTGCT CGGTTTCGGT TTAGTCGAAG GCGCGATCCT CGGCGCGGTT
CTGGGCACGG CATCCCTGTC CGTGGTGGTT CCGAAGGCTC TGGACTACAT CGACCGCGGC
AGGGGAGCGC TCAAGGGGAT CCCCACTCTT CTGCTGGCCT CCTGTCCCCT GGACAACGTG
TTCATGATCG TTTTGTTCAC TTTCTTCGCG GGCATGTACG GGGCCGCGCA GGTGAGACTG
CTGAGCGCTT TGGCGCAGAT CCCGGGTGCG ATCGTTCTGG GAGTCCTGTC TGGCGTGTTG
CCGGGGTATG TTCTCTACCG GCTCTTCGGA AAATACGACC GGTGCGCGCA GAGAGGGGCG
CTTGCCCTGT TGGGGGCCTC CATTCTCCTG GTCTGGCTGG AAAACGCTCA CCAGGGGATC
GTCACGTTTT CGAGTCTCTT CGGTGTAATG ACCATGGCGT TCATCCTGCT GGAGAAAGCC
GAACCGGTCG CCTTCGTTAT TTCCCAGCGG CTGCAGAAAC TCCGGGTCTT CGCCGAACTG
CTTCTGTTCG TTCTCCTGGG AGCCCGGGTG AACATTCCGG TGATCGGGCA AGTGGGTTTC
GAAGCGATTG CCGTGATAGT GGGCGGCCTG GCGTGCAGAA GCCTGGGAGT CGGCCTCGCT
TTGCTCGGCT CGGGGTTTGA CGGGCGAGAG AAGCTGTTCT GCGCGGTGAG CTGGCTGTCC
AAGGGTACGG CTCAGGCAGC CCTGGGCGCG ATTCCGCTCG CTGCCGGGGT GGCGTTCGGA
GAGGAAATCC TGGCGATCGT CGTGCTCTCG ATTGTGATGA CTGCTCCCGT GAGCGCCATC
CTCATGGGAT TTCTCGGCGA ACGGGTGCTG GACAAGGGCG AACCGTCTCC GTACCGGTTC
AAGGAGCTAC GGCTGAAGCT CGGCCTGCCC CGGGTAGGGG CCCGGGTTCG CAGCAAGCGC
TACGGTACGG TGTGGAAGGT GATCGAGGAG AAGGAGACCT GGATCGAGAA GCCGCGGCTC
CCGGGAAACG TGCAAGACAG CCCGGTGCTG CTTCCGGCCA TCTCGCTGCG CTATTGGCGC
CGGGATGCCG ACGGGGAGGA TGCCGCGGGG AAAACGATTT CTTTTCGCTA CAGCCAATTC
GATCCTTCGT TTAACGATCA TTGGGAGATC GTTCATGACT GGCGGGATTC ACCAAGGCAC
AGGGGGGTGT AG
 
Protein sequence
MAFSIGLIIL MGLAADLVFR RLKLPGFMGM LLVGMTVGPH GLDLMAPEMV GVSEDFREIA 
LVVLLLRAGL GLNRSTLRRV GALTIGMSCL PNLFELAAVV VTAHWLLGFG LVEGAILGAV
LGTASLSVVV PKALDYIDRG RGALKGIPTL LLASCPLDNV FMIVLFTFFA GMYGAAQVRL
LSALAQIPGA IVLGVLSGVL PGYVLYRLFG KYDRCAQRGA LALLGASILL VWLENAHQGI
VTFSSLFGVM TMAFILLEKA EPVAFVISQR LQKLRVFAEL LLFVLLGARV NIPVIGQVGF
EAIAVIVGGL ACRSLGVGLA LLGSGFDGRE KLFCAVSWLS KGTAQAALGA IPLAAGVAFG
EEILAIVVLS IVMTAPVSAI LMGFLGERVL DKGEPSPYRF KELRLKLGLP RVGARVRSKR
YGTVWKVIEE KETWIEKPRL PGNVQDSPVL LPAISLRYWR RDADGEDAAG KTISFRYSQF
DPSFNDHWEI VHDWRDSPRH RGV