Gene Sfum_1504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1504 
Symbol 
ID4460555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1865386 
End bp1866276 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content61% 
IMG OID639702271 
ProductABC transporter related 
Protein accessionYP_845628 
Protein GI116748941 
COG category[R] General function prediction only 
COG ID[COG1101] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGATCGG CGGACACGCA AGGATGGTGT ACCGCCGGAG AGCTCCTCCG TCGCGAGACA 
CGATCGCGGG GAATCCAGAT GATCGAGATA ACGGATCTTC ACAAGCGATT CAACACCGGC
ACTCCCAATG AGGTCTATGC GCTTCGGGGC ATAAACCTCA CAATAAAGGA AGGCGACTTC
GTCACCATCA TCGGCACGAA CGGATCGGGC AAATCCACGC TCCTCAACGC CATTGCGGGA
ACCTTCCTGC CGGACACGGG CAGGATCCGA ATCGCCGGCG AAGACGTGAC GAACAGGACC
GATTTCCAGA GGGCGAAACA CATCGCGCGC GTCTTTCAAA ACCCGTTCAT GGGAACCGCC
CCGGGAATGA CCATCGCGGA GAACCTCCAC ATGGCGTACC TCAGGGGGCG GAAGGTCTAT
CCCGCCATCC GGCTCGATGC AGCGCGCAGG CAGGAATATG GAAAAGAAGT GGAACAGCTC
GAAATGCAGC TCGAGGACCG GCTGGACAAC GTCATCGGGG CTCTCTCGGG GGGGCAGCGC
CAGGCGCTCA CGCTTCTGAT GGCTGTTTTG AACCGGCCGA AGGTTCTGCT GCTCGACGAG
CACACCGCGG CGCTGGACCC CAAGTCGGCC GCTCAGGTGA TCAAGCTGAC CCGCAGATTC
GTCGAAAAAG GGAACCTCAC CACGTTCATG GTCACCCACA GCATGCAGCA GGCGCTGGAC
CTGGGATGCC GCACCATCAT GATGCACAGG GGCGGAATCA TCGACGATCT CACCCTCGAC
GAAAAGCGCC GAATGACGGT GAACGATCTC CTCGCCAAGT TCGCCGAGCT CCGCCAGGCG
GAACGGCTCA CCGACGAGAT GCTCGTCGCG CTCCGGCGGG ATTACCTCTA G
 
Protein sequence
MRSADTQGWC TAGELLRRET RSRGIQMIEI TDLHKRFNTG TPNEVYALRG INLTIKEGDF 
VTIIGTNGSG KSTLLNAIAG TFLPDTGRIR IAGEDVTNRT DFQRAKHIAR VFQNPFMGTA
PGMTIAENLH MAYLRGRKVY PAIRLDAARR QEYGKEVEQL EMQLEDRLDN VIGALSGGQR
QALTLLMAVL NRPKVLLLDE HTAALDPKSA AQVIKLTRRF VEKGNLTTFM VTHSMQQALD
LGCRTIMMHR GGIIDDLTLD EKRRMTVNDL LAKFAELRQA ERLTDEMLVA LRRDYL