| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1503 |
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| Symbol | |
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| ID | 4460554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1863561 |
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| End bp | 1865189 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639702270 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_845627 |
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| Protein GI | 116748940 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCGTT CATACTTCGG TTTCGCCTTC TCCCCGTTTG ACGGCACCCG GGACCGGCGA
TTCTTTTTTG CCGCCGAAGA GCATGCGGAA ATAACCTCGG CCCTGCTCTG CTTCGTCGAG
CAGAGAAAGA GCTTCGCGCT GGTCCGCGGG GATGCGGGAA CGGGCAAGAC CAAGATACTC
CAGCATCTGC TCGGCAAATT GCCCGACTCG GTCCATCCCA TCCTGGTTCC CTACCCGGAC
GTGGAATACA TCGAGATTCT GCGCTACATA GCCAGGACCC TGGGCGTCGA CCCCAAGTGG
AAGGAAGACT ACGAACTGCT GAACGACATC AGGAAGGGGC TGACGGAGGG GCACGCGCAA
GGCAGGCAGT TCGTGCTGAT CATCGATGAA GCTCACCGTC TTTCGCTGGG TTGCCTTGAG
AATATCCGGC TTCTTTCCAA TATCGAAACG AACAAGTGCG CGCTGCTTCA AATCCTTTTC
ATCGGGCATG ACGAAATCTG CCGGAAGCTC AACCGCAGAG AAATGCGCCA GCTTCGGCAG
CGGATAAGCA TCAACCGATA CATTCCCCCG CTTACGGCTT CGGAAACCAA AGGCTACGTG
GACCACCGGC TGAAAGTGGC GGGGTCAGGC TTCGACGAGT GTTTCGAGGG CGGCGTCGCC
GAAACGATCC ATCGCATGAC CGGAGGGGTC CCGCGCAATA TCAATGAGCT GTGCCACGTA
GCCCTCCGCA TGTGCAGCAT TCAAAAGCTC CGCAAGGTCA ACAAGAGGGT GCTCAGGCAG
GCCTGTAAAG CCGTGCACGG CAATGTCGGC CCCGTGCCGG AGCGGGCGGG CGCGGCCTTC
GGCAGGAACC TCAGGATGGG GCTCCTCGGG GGGGCTCTTG CGGTCGCCGT GGGGCTGTTC
GTGGCAGAGT ATCCGCACGA CCTGCGAAAG ATCGGCGGAG AATGGATTCA CAGCCTGTAT
CGCGTCACAT CCTCCGATTC TCCCTCGGAA CGGGCTTCCC TGCCCGTCGC GCCTCCCGGA
CACATGAAGA CCGCCCGCAT CCCTGCCGGA CCACAGGAAA TCGCTCCGGA CCCGGCGCCG
TCAGCCCCGA ACGAACCTCG ATCCCCTTCC CCGTCTCCGT CCTCCCTGGT GACGGAGCCT
CTCGATGAAA GCCCCGAGAA AGGCTCGGCC AGCCCCATGC CGGGCAAAGA GGCTCCTTCG
CCCGCCGCGG CCTCCTCTGC TCCTGAAACC GGTCCGAATG TGGCTCAAGA CCCGCAGGCG
CCCGGCGTCG GCCGGGAATC CGATACGGAT CAGGAATCCG GGCAGGTTCA AGGAACCGCG
GCTGCCGACG GTTCGGGGAA TTCCGCCCCC GGGCCGGCAA ATTCAAAGCC TGAGGGAAGC
ACGGTGGAAT TCTCGGAGAC GTTCGAAGTG GTCGTGAAAA GGGGAGAGAC CTTGAGCAGA
ATTGCGGCGC AATGGTTTCC CGAGGACCCG AAGCTCGGAG AGAAGTTGAT CATCAGGGCC
AATCCAAAGC TCGGGGACAA GCACCGGATT CGGGCGGGAC AGGCCCTGAA AATACCCAGA
ACCAGCAGGA TCGATGCCGG TTCTCCGAGA GCCGGATATC CCCCTCCCTG CTCCTCTCTT
TCCGCTTGA
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| Protein sequence | MYRSYFGFAF SPFDGTRDRR FFFAAEEHAE ITSALLCFVE QRKSFALVRG DAGTGKTKIL
QHLLGKLPDS VHPILVPYPD VEYIEILRYI ARTLGVDPKW KEDYELLNDI RKGLTEGHAQ
GRQFVLIIDE AHRLSLGCLE NIRLLSNIET NKCALLQILF IGHDEICRKL NRREMRQLRQ
RISINRYIPP LTASETKGYV DHRLKVAGSG FDECFEGGVA ETIHRMTGGV PRNINELCHV
ALRMCSIQKL RKVNKRVLRQ ACKAVHGNVG PVPERAGAAF GRNLRMGLLG GALAVAVGLF
VAEYPHDLRK IGGEWIHSLY RVTSSDSPSE RASLPVAPPG HMKTARIPAG PQEIAPDPAP
SAPNEPRSPS PSPSSLVTEP LDESPEKGSA SPMPGKEAPS PAAASSAPET GPNVAQDPQA
PGVGRESDTD QESGQVQGTA AADGSGNSAP GPANSKPEGS TVEFSETFEV VVKRGETLSR
IAAQWFPEDP KLGEKLIIRA NPKLGDKHRI RAGQALKIPR TSRIDAGSPR AGYPPPCSSL
SA
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