| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1502 |
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| Symbol | |
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| ID | 4460553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1860258 |
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| End bp | 1863116 |
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| Gene Length | 2859 bp |
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| Protein Length | 952 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639702269 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_845626 |
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| Protein GI | 116748939 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAACA GTTCAAGCCT CAGGTTCTAC CTGGTCAGCC GGTTGGCCGT CATCTTCCTC
TGTTTCACGG CGGCAGCCTG CGCGGCTTTC CTGTTTTTTG CGGGCAAGCA GGATGAAGCG
GGGTTTCGAT CCGAGGCCCT GGCGGACAGA GCCCGCGGGG ACGCCGTTCT CTCCGAGCGG
ATCAGGGAAC TTCGAGAGCG ACTGGGAGCC CTCTCTTCCG ACAAGAACGT TGTCGCCGGC
CTGGTTTCAA GCGACAGGGC GGCGCTGACC GCAACCTTGA ACGCACGGTA CGCCCGCGCG
AGCGGGGTTT ACTTCGCCGT CAGGGACGCG CAGAAAGACG AATTCCTGCC CGGCGATTTA
TCCAAAGAAG TGATCGCTTC CCTGCGGGAG TTCGAGAAGG GGAGCGCGGA CACAAGCGAT
AACGAGGAAT ACCGGAGCGG GACGGGCCGC GTTGTGTTTT CCCGTATCGT GTTGAGCCAG
AACAGACGGA TCGGGACCGC ATATTGCGTC TACCTTCCCA TCGACGACCA TTCCATCGGA
CAGATCCTGG ACCGGGAGAT TTGGGGGCAG GTCTTCGTAC CCACCCGCGA GGGTCTCGCC
AGGGTCGGCG GACAAAAAGA GGCGCCCTCC CCCGCTCCCG ACGACCTCGG GAGCCTGAAG
CCCGGCGACA TCCGGGACGG CCGGGTCGGC GGGAGTGACG GCCTTGTCTC CCGGAGCACC
GTTTCCCCCC TGCACGTCTA CTTCGCGCCC TACGCGAAGA TGCGGGAGTT TCGGCTGAAG
GCCCTTGCCA TCGTCGGGGC GCTGGGCCTC GCCATGCTCA CCTTGTTCGT GGCACTCTCT
TTGCTGATCG CCCGGAGAAT CGTCGGTCCG CTTGAGTACC TCGTCGGCCG CGCCTCGGCG
GTATCGAGAG GCGTGAAGGT GGATTTCACC CCTCCCGATG GAGGGCAGTT CGCCGAGTTC
GAAGGGTTGA ACGAGGCTTT CGACCACTTG CTCGTCAAGC TGGACGAATA CGAAAACAAG
AGCCGCTATA AGGAATTCTT CGACAGTGTC AGCGATGCGG TTTGCATCAG CGACATGCAG
GGCAACATCA TCGAGGCCAA CGAAACCGCT TATCGCGTGA CGGGCTGCGG GCCGGTCGAG
ATGCGGACGA AGAAGTTGTG GGAGATATAC GATGTGGCGC ACCCCGACAA GGTGTTCTCG
GAGGTCTTCA CGGGTGGTGA AACCGTGTTC AAAGTCTCCC GGCGATCGGA GGAAGGTCGC
CTCCAGTCGG TGGAGGTGAA GGCGAAACTG ATTTTCTACA AGGGTCACGA GTGCATTCTC
ACCCTGGCAC GGGACATCGG GGAGTGGGAA AGGGCCATGG ATTCCATCAG GACCTCCGAA
GCGAAATACC GGGCCCTTTT CAACACGGTC AGCACGGCCA TGGCCATTGT CGAGAAAGAC
AAGACCATCG CGCATGCCAA CGACGAATTC TGCAGGCTTT GCGGCGTTCG CCGCAACGCG
GTCGAAGGGT TTCTGTCACT TGAAAACTTT CTGCGAAAAG CGGATTGCGA CAAGATAGGA
TTCTTCAACG TCGACAAGAC CCAGGCTCCC CCTCCGATAC CCTTGGACCG TTGGGAGTCC
GAGCTCGTCA GACCCGACGG CACCGTTCGC CAGGTGGAAA TCCGGGTGAC CGAAATGCCG
GGAGTTTCTC AAATACTGAT CGTCCTGCTG GACCTGACGC AACGGAAAGC CCTGGAAGCG
CAGGTGCTCC AGTCGGAAAA GCTTGCCGCA CTGGGACAGC TCATCTCCGG GGTCGCCCAC
GAGCTCAACA ATCCGCTCGC CAGCGTGGTG GGGTATTCGG AACTGGTGCA GGCGGGCCAG
GCGAGCGCAA AGGACAAGAA GCACCTGGAA ATCATCAAGA ACGAAGCGTT GAGGGCGTCC
GCCATCGTGA AGGGACTGCT CACCTTTGCC AGGGAACGCA AACCCGAAAA ACAGATGATC
CAGGTCAATG AGGTCCTCGA GAGGACGTTG GGCCTCCGGC TCTATGATTT CAAGGTCAGG
AATATCCAAC TCGTCATGAC CCTTGATTCC CAACTGCCGC CCACCCATGC CGACTTTTTC
CAACTCCAGG TGGTGTTCCT CAACATCATC AACAATGCGG AGCACGCCAT GGGCGAAAAC
GTCGGGGACA AAATCCTGAC TGTTTCCAGC AGGCTCATGA TGGACGGTAA GGTAATCGAA
GTCGAGATCA CGGACAACGG CTCGGGCATA CCGGATGAAA TGAAGAACCG GATCTTCGAC
CCGTTCGTCA CCACGAAAGA GGTGGGAAAG GGTACGGGGC TCGGGCTCAG CGTCTCTTAC
GGGATCGTGC AGGAGCACCA GGGACAGATT CTCGTCGAGA GCAACCTCGA CAAGGGAACC
GCCTTCAAGG TCCGTCTTCC GATCATGCAA AGCGAGGCAA TGGAGGCACG CCGCGCCGAA
ACGGCATCAC TTCCCAGGCC TCCGGGCATG GGCGAGACCA AGGTCGTGCT CGTGGTGGAC
GACGAGCCCT TCACATTGGA GCTCCTGAAG CAGTTCCTCG CCCAGTACGG CTGCCAGGCC
ATCCTTGCCG GCGATGCAAT AGAAGGCCTG AAGGTTCTGA GAACATACAA GGTCGATGCC
ATTATTTCGG ACATTCGGAT GCCGGGGATA GACGGAAAGG GTTTTCTTTC GAACATCGAG
AGCGAATTCC CGGCCTTCAT GAAGAAGTTC GTGTTCATAA CCGGGGATAC CGTGAACCAG
GACATTTACA ACATGCTGAG GGAAAAGAAG ATCCCCTGCA TTTTTAAGCC GTTTGGAATG
AACGAGCTGC GAGAGGTTCT GAAATCGATC ATGCATTGA
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| Protein sequence | MFNSSSLRFY LVSRLAVIFL CFTAAACAAF LFFAGKQDEA GFRSEALADR ARGDAVLSER
IRELRERLGA LSSDKNVVAG LVSSDRAALT ATLNARYARA SGVYFAVRDA QKDEFLPGDL
SKEVIASLRE FEKGSADTSD NEEYRSGTGR VVFSRIVLSQ NRRIGTAYCV YLPIDDHSIG
QILDREIWGQ VFVPTREGLA RVGGQKEAPS PAPDDLGSLK PGDIRDGRVG GSDGLVSRST
VSPLHVYFAP YAKMREFRLK ALAIVGALGL AMLTLFVALS LLIARRIVGP LEYLVGRASA
VSRGVKVDFT PPDGGQFAEF EGLNEAFDHL LVKLDEYENK SRYKEFFDSV SDAVCISDMQ
GNIIEANETA YRVTGCGPVE MRTKKLWEIY DVAHPDKVFS EVFTGGETVF KVSRRSEEGR
LQSVEVKAKL IFYKGHECIL TLARDIGEWE RAMDSIRTSE AKYRALFNTV STAMAIVEKD
KTIAHANDEF CRLCGVRRNA VEGFLSLENF LRKADCDKIG FFNVDKTQAP PPIPLDRWES
ELVRPDGTVR QVEIRVTEMP GVSQILIVLL DLTQRKALEA QVLQSEKLAA LGQLISGVAH
ELNNPLASVV GYSELVQAGQ ASAKDKKHLE IIKNEALRAS AIVKGLLTFA RERKPEKQMI
QVNEVLERTL GLRLYDFKVR NIQLVMTLDS QLPPTHADFF QLQVVFLNII NNAEHAMGEN
VGDKILTVSS RLMMDGKVIE VEITDNGSGI PDEMKNRIFD PFVTTKEVGK GTGLGLSVSY
GIVQEHQGQI LVESNLDKGT AFKVRLPIMQ SEAMEARRAE TASLPRPPGM GETKVVLVVD
DEPFTLELLK QFLAQYGCQA ILAGDAIEGL KVLRTYKVDA IISDIRMPGI DGKGFLSNIE
SEFPAFMKKF VFITGDTVNQ DIYNMLREKK IPCIFKPFGM NELREVLKSI MH
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