| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1500 |
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| Symbol | |
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| ID | 4460551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1857213 |
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| End bp | 1858172 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639702267 |
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| Product | type II secretion system protein |
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| Protein accession | YP_845624 |
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| Protein GI | 116748937 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.34697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACAAG AAAACCTTGC TCTCATCGTC GCTGCAATGG TGTTTGTCAT TGCCTGCCTG
CTCGTTTTGA GCGTGGCCCT TTACTGGCGC CACCGGGAAA CCCGCAAACG GATCATGGAA
AAGATCAGGC AGGACGGCCT GGAGCTCTCG GGCGTCGAAG CCGAACCCGC CGTCCAGGAA
ATCACGGGTG CAAAGCGCGG CCCCATCGTC AGTTTTTTCG ATAGAGTGGG CAAGAGGATG
AAGACCGAGA AACCGTCGGA GCTGCGCGCG CAACAGCTCC GCTTCCTGAG GGCGGGCATC
CGCATGGAAA ACGCGCCGGC CGTCTTCATG GGGGCGAAGT GCCTGGGCGG CCTTGGCCTG
GCCTTCGGTT TCCTGCTGCT CAAAACCGTT TTTTTCTCGC TCATGAGCGC ACGGCTCACC
GCAGTGGCCG CCTGTGCGAC CGCGCTGGTG GGCTTCTACC TCCCCGACCT CTGGCTCAGG
CTCAAGACCT CCAGGCGCCG CAAGCAACTC CGAAGAGGCC TCCCCGACGC CCTGGACCTG
ATGGTCGTGT GCGTGGAAGC CGGGATGGGC ATCGATTCCG CAACCTACCG CGTGTCCGAG
GAGATGAAAC TCACCAATGC GCCCATGAGC GACGAACTGA AATATCTCAA TCTCGAGCTC
CGGGCCGGCA AGGCGCGACG CGACGCGCTG AGGAACCTGG CCTTGAGGAC GGACCTCGAG
GACGTCAATT CCCTGACCAC CCTGCTTATT CAGACGGACA AGTTCGGCAC CAGCGTGGCC
CAGGCCCTGA GAGTGCATTC GGATTCATTC AGGACCAAAA GGCACCAGAT GGCCGAGGAG
CTCGCGGCCA AGCTGCCGGT GAAGCTCGTG CTTCCCCTGA TTCTCTTCAT CTTTCCTTCG
CTTTTCGTGG TGATCATGGG ACCGGCGATG ATCCGGGCGT TTCGGACGTT CATGAAATGA
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| Protein sequence | MPQENLALIV AAMVFVIACL LVLSVALYWR HRETRKRIME KIRQDGLELS GVEAEPAVQE
ITGAKRGPIV SFFDRVGKRM KTEKPSELRA QQLRFLRAGI RMENAPAVFM GAKCLGGLGL
AFGFLLLKTV FFSLMSARLT AVAACATALV GFYLPDLWLR LKTSRRRKQL RRGLPDALDL
MVVCVEAGMG IDSATYRVSE EMKLTNAPMS DELKYLNLEL RAGKARRDAL RNLALRTDLE
DVNSLTTLLI QTDKFGTSVA QALRVHSDSF RTKRHQMAEE LAAKLPVKLV LPLILFIFPS
LFVVIMGPAM IRAFRTFMK
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