Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1498 |
Symbol | |
ID | 4460549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 1854687 |
End bp | 1856093 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639702265 |
Product | type II secretion system protein E |
Protein accession | YP_845622 |
Protein GI | 116748935 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAACT TTATGAACCG CAAACCCGAG CCGTCTTCCC GGGAAGAGAA CGACGCGGCC ATGGTCCGGG CCGAAGCGCC GGAAGAGCTC ATGCGCAGGA GAACCAGGAA GCGCAGCATC ATTCCCAACG AGTACTACGA GCTGAAAACT CGAATCCACG ACCGCCTGAT CGACCTGATC GACCTTTCGC TGCTCGACTC CCTCGACGTC AACGTGCTCA AGGTTCAAAT CAGGAAGCTG GTGGAGAGAA TACTCCTCGA GGAGGAGAAT CAAATCCCGT TGAACCTCAA CGAGAGGGAT CATCTCTTCC GGGAAATCCA GGACGAAGTC TTCGGATTCG GCCCCCTCGA GCCTTTCCTG CAGGACCCGA CGGTGTCCGA CATCCTGGTG AACACGTACC GGCAAATCTA CGTGGAGCGC TTCGGAAAGC TGGAGCTCAC CGAGGCGAGG TTCAAGGACG ACGGGCACCT CAGGAAGATC ATCGACAAAA TCGTTTCGGC CGTGGGACGG CGCATCGACG AGTCCTCGCC GATGGTGGAC GCGCGCCTCC CGGACGGCTC GCGCGTGAAC GCCATTATCC CGCCCCTTTC CCTCGGAGGC CCGGCGCTTT CCATACGCCG CTTCTCGAGA GATCCGCTCG AGATGGGAGA CCTCATCACC CTGAACACCC TGACGCCCGA AATCGGCGAA GTGCTCAAGG CCATCATCAA GGCGCGGCTC AACGTCCTCA TTTCGGGGGG AACCGGCAGC GGGAAGACGA CCCTTCTGAA CGTTCTGTCG CGGTTTATCC CCGAGGAGGA ACGGATCGTC ACCATCGAGG ACGCGGCCGA GCTTCAGCTC AAGCAGACTC ACCTGGTCAG GCTCGAAACC CGCCCGCCGA ATATCGAGGG AAAGGGCGAA GTGACCCAGC GTGAACTGGT GAAGAACACG CTGAGAATGC GTCCCGACCG GATCATCGTC GGCGAGGTCA GGGGCCAGGA AGCTTTCGAC ATGCTCCAGG CCATGAACAC CGGTCACGAC GGGTCGCTCA CCACCATTCA CGCCAACTCG CCCAGGGATG CCCTGATGAG GCTGGAGACC ATGGTGGCCA TGGCGGGGCT GGAGATTCCG GGCGACTTTC TGAGAAGGTA CATCGCTTCG GCCATCAACA TCGTGGGCCA GCTTTCCCGC CTGGCCGACG GAAGCCGCAA GCTCGTCAGT CTCCAGGAAA TCACCGGCAT GGAAGGAAGC ATGGTGACCA TGCAGGAAAT CTTCACCTTC GAGCAGACGG GGATCGACGC GGAGGGCAAG GTGAAGGGGA GATTCAAGGC GTGCGGCATC CGGCCGAAGT TCGTGGAGAA ACTGGACGCC ATGAGCATCG CCCTCCCCAA AGGCATTTTC GATCCCCGAA GAGTCAACGA CATCTGA
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Protein sequence | MFNFMNRKPE PSSREENDAA MVRAEAPEEL MRRRTRKRSI IPNEYYELKT RIHDRLIDLI DLSLLDSLDV NVLKVQIRKL VERILLEEEN QIPLNLNERD HLFREIQDEV FGFGPLEPFL QDPTVSDILV NTYRQIYVER FGKLELTEAR FKDDGHLRKI IDKIVSAVGR RIDESSPMVD ARLPDGSRVN AIIPPLSLGG PALSIRRFSR DPLEMGDLIT LNTLTPEIGE VLKAIIKARL NVLISGGTGS GKTTLLNVLS RFIPEEERIV TIEDAAELQL KQTHLVRLET RPPNIEGKGE VTQRELVKNT LRMRPDRIIV GEVRGQEAFD MLQAMNTGHD GSLTTIHANS PRDALMRLET MVAMAGLEIP GDFLRRYIAS AINIVGQLSR LADGSRKLVS LQEITGMEGS MVTMQEIFTF EQTGIDAEGK VKGRFKACGI RPKFVEKLDA MSIALPKGIF DPRRVNDI
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