| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1495 |
|---|
| Symbol | |
|---|
| ID | 4460546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 1851561 |
|---|
| End bp | 1852043 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639702262 |
|---|
| Product | TadE family protein |
|---|
| Protein accession | YP_845619 |
|---|
| Protein GI | 116748932 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4961] Flp pilus assembly protein TadG |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGA AACGTGTCGT GCCCAGGTTC CGCAAAGGCG TGGCGGCCAT CGAGTTCGCG
CTCATCCTGC CGCTGCTCGT GCTCCTGTTG TTCGGCATCA TCGAGTTCGG GATCATTCTC
TACGACCAGG CGGTGATCAC CAACGCCAGC AGGGAAGGCG CGCGGTTCGG GATTCTCTAC
GGCGCGGCAG CCGACGGCAC CGCCACACCG AAGAGTGAAG CGGAAGTCAG GCAGGTCGTG
CGCAACTACG CGCAGCAGTA TCTCATCACC TTCGGGACCA AGGTGCTGGG GGACGCCGAC
ATCAATGTGG CCGAGGAAAC CGTGAACGGG CAAAACTATC GCAGGGTCAC GATCAGCTAT
CCCTACACGT TTATCGTGCT GCCCCGGTTC ATCACGTCCT TTTTCGGCGG CGGCCTGGGG
CAGGACATCA ATCTGTCGGC AAACGCGGTG ATGCGCTACG AGTACCAGGG CCCGGCAGTC
TAG
|
|---|
| Protein sequence | MKTKRVVPRF RKGVAAIEFA LILPLLVLLL FGIIEFGIIL YDQAVITNAS REGARFGILY
GAAADGTATP KSEAEVRQVV RNYAQQYLIT FGTKVLGDAD INVAEETVNG QNYRRVTISY
PYTFIVLPRF ITSFFGGGLG QDINLSANAV MRYEYQGPAV
|
|---|
| |