Gene Sfum_1489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1489 
Symbol 
ID4461459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1846845 
End bp1847018 
Gene Length174 bp 
Protein Length57 aa 
Translation table11 
GC content56% 
IMG OID639702256 
ProductFlp/Fap pilin component 
Protein accessionYP_845613 
Protein GI116748926 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3847] Flp pilus assembly protein, pilin Flp 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.60376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT TCATCAAGTT CCTGAAAGAC GAAGAAGGCG TGACCGCGAT CGAGTACGGT 
CTCATCGCCG CCCTGATCGC CGTCGCGATC ATTGTTGCGG TTACCTCCGT GGGCACGAAT
CTCACGGCCG TCTTCAATAG GGTCGCCGCC GAGTTGTTAG GCGCGCTCAA TTAG
 
Protein sequence
MKKFIKFLKD EEGVTAIEYG LIAALIAVAI IVAVTSVGTN LTAVFNRVAA ELLGALN