| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1487 |
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| Symbol | |
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| ID | 4461457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1843738 |
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| End bp | 1845213 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639702254 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_845611 |
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| Protein GI | 116748924 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.470629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.424816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGC AGGGTTCAAC AAAGCCCAAA GTGCGCTTGC GCCTCATCGT GGCTCTGCCG
GTTGCCACGT CCATTCTGAT GCTCGTCGGA GCGCTCCTGA CCTCCTACCT GATGCCCCAG
CAGCTGCCGT GGCCGGGGCA GGATTCCATG CCGGACCTGA GGACGGTGAT CCTGCTGTCT
GTGTTCTGCA CGATCATCCT GTCGTTTCTG CTCAACCTCC TGGCCGCCTT TCTCATCAGC
CGCAACCTGA AGAGACTCAT GGTCAAGGCA AGCTCCATGA TTCCCGTGGG GCCCGAATCC
ATGCAGAAGT CCGAAGCCGC GAACGAGATG AAGGCCCTGG GGATCATTCT CGACGAAGTC
GAAGTCACCC TCGACCGCTT CATTCAGGAC AGCTACATCC TGGAAAACCT TCCCGAAGCG
CTCATCACGG TGGACGCCGC GGGGGAGGTA CGGGCGCTGA ACAGGAGGGC GGCGCGATTG
TTCAACACGG CGTTGTGGAA CATCAGGGGG AGACGCCTGG AGGAGATCGT CCCGAAAAGC
CTCCGCAACG AGTCTTTCCA CCGGATGGTG CTCAAGGGTT TCGAGGGGAC CGAAAGCCAT
TCGAGCCTCA TCCGCCTGTC CACGGACGCC AAAGCGGAGC TTGTGCTCTG GGTGGGTGTC
AGCCCGGTGG AATTGAGCGG AGGGCAGCGC GGAGTCACCA TATCGTTCAA GGATCAGACG
GATATCGTCT CGGTGAGAAA CCAGATCCAG AAGTTGGAAC GGCTTGCCGC CGTGGGGAAG
GTCTCCGCGC ATATCGCTCA CGAGGTCCGC AATCCGCTCG GTTCCATCAA AACCCTAACG
GAGTTGATTC GAGAGGACTT GAGGCCGGAC GAGACGCAGG CGAAATATGC CGACGTCATT
TTGGACCAGG TGGGCAGGCT GGACCGGCTC ATCGAGGACG TTCTCTCCTT CTCCCGCAGC
TCCCTGCTGA ACGTGGAGAA AGCCGAGCTC CCCGTCCTGC TTTCCCAGAT GATCGATCTC
GCCCGGCACA GTTTTCCCGA AAAGGGCGTG AACGTCGAGG AACAATACGA TCCCGTGCTT
CCGCCCGTCT GGTGCGACCC GGAAAGACTC TGCCAGGCCT TCCTGAACGT TCTCATCAAC
GCGTTCGAGG CCTGCGCCGC CGGAGGGCAC ATCAAGGTTT CCGCCACGTA TGAGCGGGGC
GGCACGGCCA ACGGAAGCGT GATCGGGATC CGGGTCAAGG ACGACGGGCC CGGGATCCCC
GAGTCCAATC TGCAGAAGGT TTTCGAGCCC TTCTTTACGA CGAAATCGCA CGGCACGGGG
CTCGGGTTGG CTTGCACCTA CAATATCATC AACGCCCACG GCGGCAGGAT CGAATTCGCG
AACAGACCTT CCGGCGGAGC CTCGGTCCAT ATCCTCCTGC CGGAAAATCA CACGCTCGAG
TCCCCGCTGG ACGAACCGGT GGAGTACCAT GGCTGA
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| Protein sequence | MDKQGSTKPK VRLRLIVALP VATSILMLVG ALLTSYLMPQ QLPWPGQDSM PDLRTVILLS
VFCTIILSFL LNLLAAFLIS RNLKRLMVKA SSMIPVGPES MQKSEAANEM KALGIILDEV
EVTLDRFIQD SYILENLPEA LITVDAAGEV RALNRRAARL FNTALWNIRG RRLEEIVPKS
LRNESFHRMV LKGFEGTESH SSLIRLSTDA KAELVLWVGV SPVELSGGQR GVTISFKDQT
DIVSVRNQIQ KLERLAAVGK VSAHIAHEVR NPLGSIKTLT ELIREDLRPD ETQAKYADVI
LDQVGRLDRL IEDVLSFSRS SLLNVEKAEL PVLLSQMIDL ARHSFPEKGV NVEEQYDPVL
PPVWCDPERL CQAFLNVLIN AFEACAAGGH IKVSATYERG GTANGSVIGI RVKDDGPGIP
ESNLQKVFEP FFTTKSHGTG LGLACTYNII NAHGGRIEFA NRPSGGASVH ILLPENHTLE
SPLDEPVEYH G
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