Gene Sfum_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1486 
Symbol 
ID4461456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1842205 
End bp1842870 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content63% 
IMG OID639702253 
Productisoprenylcysteine carboxyl methyltransferase 
Protein accessionYP_845610 
Protein GI116748923 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0410752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.390877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC AAGTGAAGAC GTCACGCATG GACATCGGGA GGCTGGTGGC GGCCCCGGTG 
TTTGCTCTTC TCCTCTTCTT CAGCGCCCGG GGGCTCCTCG GAGGTCTGAG CTCGCTTTTC
CCGCTGGATG CGGCGAAGGC ACTCCTGCTG GTACACCGCC TGCTCATTGT TGCATTCTAC
GTGCTGATTG TCGTTCTCTA TTTCATGAGA ACCGCCGCGA GCTCAACGAC CCGGTCCATC
CCTGCCAGGT CCATTGCCGT GGGGGCAAGC TTCCTTCCCT TCGCCATCCC TCTGGCCGGC
GGCGCTTCAG ACGCGAGCCC GGTGGTGATG CTCGGCGCCA ACGTGATCAT GGCCTCGGGC
ATGGCCTTTG CGCTTGCGGC GCTTTTCGCC CTCGGCAGGA GCTTCAGCAT TATCCCCCAG
ACGCGAAGCC TGGTGATGCA CGGCCCCTAT CGCCTGGTGC GGCACCCGCT CTATCTCGGC
GAACTGGTGA CGGTGGCGGG TTTCGTGCTT GCGGGCGTCG CGCCGGCCAA GGTGCTCATC
TTTGTCCTGC TTGCGGCGTG CCAGGTTTAT CGGGCCTTGC AGGAGGAAAA GCTCCTCGCG
GCAATGTTCC CGGAATACGA AGGGTATGCT TCCCGAACCC CCCGCCTGCT GCCCGGAGTT
TTCTAG
 
Protein sequence
MKTQVKTSRM DIGRLVAAPV FALLLFFSAR GLLGGLSSLF PLDAAKALLL VHRLLIVAFY 
VLIVVLYFMR TAASSTTRSI PARSIAVGAS FLPFAIPLAG GASDASPVVM LGANVIMASG
MAFALAALFA LGRSFSIIPQ TRSLVMHGPY RLVRHPLYLG ELVTVAGFVL AGVAPAKVLI
FVLLAACQVY RALQEEKLLA AMFPEYEGYA SRTPRLLPGV F