Gene Sfum_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1478 
Symbol 
ID4461448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1834545 
End bp1834988 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content63% 
IMG OID639702245 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_845602 
Protein GI116748915 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.538319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCC TGACCGCTCC CAGAATGGAG AGGTGCATCG GTTGCCACTC CTGCTCCCTG 
GCGTGTGCCC GGTTGGTGCA CAAGATGCTC TCGTGGGACA TGGCGGGAAT CCGGATCGCT
TCCTCCGGGG GGCTCTCCAC GGGGTTCGAA GCCAGAACTT GTCTCGCCTG CCTGCCTGCT
CCATGCGCGG CCGCCTGTCC TACCGGCGCT TACGCGCAAC GAAAGGGCGG GGGCGTCATC
GTCAGGAAGA ACCTCTGCAT CCGCTGCGGC AAGTGTGCCG ATGCCTGCCC GGTGGACGCC
GTCTTTCTCG CCCCTGACGG AGAACCCTTC GTGTGCATCC ATTGCGGACG GTGCGTCGTG
TATTGTCCGC ACGACTGTCT CGAACTGACG GACGTCGGAA CCGAAGGAGC GGAAGAAAGC
AACGCTCGGG AGAGTGCGTC ATGA
 
Protein sequence
MKILTAPRME RCIGCHSCSL ACARLVHKML SWDMAGIRIA SSGGLSTGFE ARTCLACLPA 
PCAAACPTGA YAQRKGGGVI VRKNLCIRCG KCADACPVDA VFLAPDGEPF VCIHCGRCVV
YCPHDCLELT DVGTEGAEES NARESAS