| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1471 |
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| Symbol | |
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| ID | 4461527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1824688 |
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| End bp | 1826739 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639702238 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_845595 |
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| Protein GI | 116748908 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0323823 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATCTA TGCGCGCAAT CGACGAATGG ATACCAGGCG AGGGAGTTCC ATGGCCCCTT
GGGGCGAGTT GGATGGAGTC GCAACGGGCA TACAATTTCG CGCTCTTTTC GCGCAACGCC
CGGAGCGTCA CCCTTTTGCT CTACACCGAG GACGATCCAG TCATCCCGGT CCAATTCCGT
GTTCTTGACC CCGTCTTCAA CAAGACTGGC CTGATATGGC ATTGCGCGGT GCCGGAGGAG
GAGCTGCGGG GCGCCTGCCT CTATGCGTAC CGAATCGACG GCCCTTACGA CCCGCTCAAC
GGGCATCGAT TCGACGCGGG GAAAGTTCTC CTGGATCCCT TTGCCCTTTC CGTCCATTTC
CCGCCCGGGT TCAGCCGAAC CTCGGCCTCG GGGTCGGGCC CCACGGACGG CATGGCACCC
CTGGGGCGGC TCTCCAAGGA TCCGAACGCA TTCGACTGGG GCGAGGACCC GCGCCCTCGC
CATGCCCACG ATCTCATCGT CTACGAACTG CACGTCAAGG GCTTCACGGC AAGGCCCAAC
TCGGGCGTGA GCCCGGAAAA CCGAGGGACC TTTGCCGGGC TCGTGGAGAA GATATCGTAC
CTGAAGGATC TCGGGATCAC CGCCGTGGAG CTCCTTCCCG TCCATCAGTT CGATCCCCGG
GAGGGAAACT ACTGGGGCTA TATGACCCTC AACTTCTTCT CGCCCCACCA CGGTTACGCA
TCAGGCGATC CCCACCGGGA ATTCCGTGCG ATGGTGAGAA CCTTTCACGC CGCGGGAATC
GAGGTATGGC TCGACGTCGT CTACAATCAT ACCAGCGAGG GCGGCGAGAA CGGTCCCACC
TACAGCTACC GCGGTGTGGA CAACAAAAGT TACTACCTCG CCCGGCAGGA TACCGGCGAG
TACTTCAACG ACACCGGATG CGGGAACACA ATGAACTGCG CGCATCCCGT CGTTCGGGCA
CTCGTTCTGA CCAGCCTGCA TCACTGGGCG AAAAACATGC ATGTGGACGG GTTCCGCTTC
GACCTGGCAT CCATTTTCGC GCGCGCGCTC GACGGCTCCA TGAACACCCT GGACCCGCCG
CTGATCGCGG AGATCGGCCT ACTCGGATAC ATGCGCGACG TGAGGCTCGT CGCGGAGGCA
TGGGATATCG GGAGTTACCT GCTCGGTCGA AGCTTTCCCG GCCTGATGTG GCGCCAGTGG
AACGGGAAAT TCCGCGACGA CATCCGCTCT TTCGTCAAAG GGGACGCAGC GATGGTCGGA
GCCCTGATGC AACGCCTGTA CGGGAGTGAT GACCTTTTTC CGGACGGGCC GGTGGAGGTG
TATCGCCCGT ACCAGAGCGT GAACTTCATC ACCGCCCACG ACGGTTTCTG TCTCTACGAT
TTGGTTGCTT ACAACGAAAA GCACAACACG GCCAACGGCC ACCACAACAC GGACGGGGCA
AACGACAACC GGAGCTGGAA TTGCGGCTGG GAGGGCGACT CCGGGGTTCC CCTTGAAGTC
ATGGCGTTGC GCCGGCAGCA GGTCAAGAAT TTTTTCTGCC TGCTCATGCT TGCCAACGGA
ACCCCCATGT TCTGCGCCGG TGATGAATTC ATGAACACAC AGAAAGGCAA CAACAACCCT
TACAACCAGG ACAATGAGAT CACCTGGCTG GACTGGGAGC TTCTCGAACG CAACCGGGAC
ATGCTGCGCT TCTTCAAGGG CATGATCCGA TTCCGAAAAA CGCATCCGTC CATCGGTCGG
GGCCGCTACT GGCGCGAGGA CGTCCGGTGG TACGGAAGCA CGGGGGAAGT GGACCTTTCC
CAGGAATCCA GGTCTCTGGC CTACTTTCTG CGCGGGTCCG GTCTCGGCGA CAGCGACCTC
TACGTGATGA TCAATGCATA CTGGGAAGAC CTGGATTTCG CCCTCCAGGT CGGTCGGGCT
GGGGAGTGGC GCCGTGTTGC GGATACTGCC CTTCCGAGCC CGGACGACAT TGCGGAGACG
GGACGAGGAC ACCCCGTTTC CGGTCTCCGG TATCGCGTGA AGGCCCGATC GATCGTGGTT
TTTGAGCGAT GA
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| Protein sequence | MGSMRAIDEW IPGEGVPWPL GASWMESQRA YNFALFSRNA RSVTLLLYTE DDPVIPVQFR
VLDPVFNKTG LIWHCAVPEE ELRGACLYAY RIDGPYDPLN GHRFDAGKVL LDPFALSVHF
PPGFSRTSAS GSGPTDGMAP LGRLSKDPNA FDWGEDPRPR HAHDLIVYEL HVKGFTARPN
SGVSPENRGT FAGLVEKISY LKDLGITAVE LLPVHQFDPR EGNYWGYMTL NFFSPHHGYA
SGDPHREFRA MVRTFHAAGI EVWLDVVYNH TSEGGENGPT YSYRGVDNKS YYLARQDTGE
YFNDTGCGNT MNCAHPVVRA LVLTSLHHWA KNMHVDGFRF DLASIFARAL DGSMNTLDPP
LIAEIGLLGY MRDVRLVAEA WDIGSYLLGR SFPGLMWRQW NGKFRDDIRS FVKGDAAMVG
ALMQRLYGSD DLFPDGPVEV YRPYQSVNFI TAHDGFCLYD LVAYNEKHNT ANGHHNTDGA
NDNRSWNCGW EGDSGVPLEV MALRRQQVKN FFCLLMLANG TPMFCAGDEF MNTQKGNNNP
YNQDNEITWL DWELLERNRD MLRFFKGMIR FRKTHPSIGR GRYWREDVRW YGSTGEVDLS
QESRSLAYFL RGSGLGDSDL YVMINAYWED LDFALQVGRA GEWRRVADTA LPSPDDIAET
GRGHPVSGLR YRVKARSIVV FER
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