Gene Sfum_1469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1469 
Symbol 
ID4461525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1820715 
End bp1821749 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content61% 
IMG OID639702236 
Productfructose-bisphosphate aldolase 
Protein accessionYP_845593 
Protein GI116748906 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0191] Fructose/tagatose bisphosphate aldolase 
TIGRFAM ID[TIGR00167] ketose-bisphosphate aldolases
[TIGR01520] fructose-bisphosphate aldolase, class II, yeast/E. coli subtype 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0227656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATCG CCGATTATGC AACGTATTGC AGAATGCTCG ATCGAGCCAA AGAAAACCGT 
TTTGCCTACC CGGCCATCAA TGTCAGTTCC CTCACCACGG CCAACGCCGT CTTGAAGGGG
CTGGCCGAAA GCCGAAGCGA CGGAATCGTC CAGGTATCCA CGGGAGGAGC GGCATTCGCT
TCAGGAACAT CCGTGAAGGA CATGGTGCTG GGGGCCATAT CCATCGCCGA GCACGTCCAC
AGGGTTGCCG ACCGTTACAA CGTCTACGTC GCCCTGCACA CGGATCATTG CCAGGCCCAG
ATGCTGGAGA GCTTCCTCAT CCCCCTCGTA GAGGAAACGG AGCGGCGTCG CAAGGCCGGG
CTCCCCAACC TCTTCAACAG CCATATGTTC GACGGGAGCG CCCTGCCCCT CAAAGAGAAC
CTGGATATCG CCGTCCCGCT TCTCGAGCGC TGCCGCCGAA GCGACATGAT CCTGGAAGTC
GAGGCCGGGG TGGTCGGCGG CGAGGAGGAT GGAATCAAAG TGGAAGGGGC TCCCGCCGAG
AAGCTCTACA CAACCCCCGG GGACATGCTG GAGGTTGCCC GCCGCTTCGG TGCGGTCAAG
GGAGCACGGT TTCTCCTTGC CGCGACTTTC GGCAATGTCC ACGGAGTCTA CAAACCCGGC
CACGTCAAGC TCAAACCCTC CATTCTCAAA GACGGCCAGG ATGCCGTGGA GAAAGCATAC
GGCAGGGACG CCCGGTTTTA CCTCGTGTTT CATGGGGGTT CCGGCTCGCT TCCGGAAGAA
ATTCATGAGG CCATCGATTA CGGCGTCGTG AAGATGAACA TCGACACCGA CACGCAGTAC
GCCTTCACGC GCGCAGTGGC CGACCACATG ATGAAGAACT ACGATGCGGT GCTCAAGGTG
GACGGAGAAG TGGGCAACAA GAAGAAATAC GACCCCCGAT CCTACCTCGC CCTGGCCGAA
GCGGCCATGG CCGAGCGGGT CAAGGCGGCG GTCGCCGCCC TGAGGGGAAC CGGCACCACC
CTCTGCACCG GGTAG
 
Protein sequence
MPIADYATYC RMLDRAKENR FAYPAINVSS LTTANAVLKG LAESRSDGIV QVSTGGAAFA 
SGTSVKDMVL GAISIAEHVH RVADRYNVYV ALHTDHCQAQ MLESFLIPLV EETERRRKAG
LPNLFNSHMF DGSALPLKEN LDIAVPLLER CRRSDMILEV EAGVVGGEED GIKVEGAPAE
KLYTTPGDML EVARRFGAVK GARFLLAATF GNVHGVYKPG HVKLKPSILK DGQDAVEKAY
GRDARFYLVF HGGSGSLPEE IHEAIDYGVV KMNIDTDTQY AFTRAVADHM MKNYDAVLKV
DGEVGNKKKY DPRSYLALAE AAMAERVKAA VAALRGTGTT LCTG