| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1468 |
|---|
| Symbol | |
|---|
| ID | 4461524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 1819644 |
|---|
| End bp | 1820657 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639702235 |
|---|
| Product | glyceraldehyde-3-phosphate dehydrogenase, type I |
|---|
| Protein accession | YP_845592 |
|---|
| Protein GI | 116748905 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0221795 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAGG TGGGAATCAA TGGATTTGGA AGGATCGGTC GCCAGGTCAT CAAGGCGGCC
ATGGAGCGAC ATCCGGATAC ACTGCGGGTC GTGGCCGTAA ACGACTTGTT CGACGTACAG
ACCAACGCCC GCCTCTTCAA GCACGATACG AACTACGGCC TGTTTGCAGG AAGCGTGGAG
GCGCGCGGAG ACGATCTGCT GGTGAATGGC TCCCCCATCA GGTCCTTTGC CGAACGCGAT
CCGGCTATGA TACCGTGGGA TGACCTGCAG GTCGACCTGG TGGTGGAGTC CACGGGCATT
TTCACCACGG GCCCCAAGGC GGCGGCTCAC CTGGAGGCCG GCGCGAAAAA GGTGATCATA
TCGGCGCCCG CAAAGCAGAT CGACCAAACC ATCGTCATGG GCGTGAACCA TGAACAGTAC
GACCCGGAAA AGCACCGGAT CGTCTCCAAC GCCTCCTGCA CCACGAATTG CCTGGCGCCC
CCGGTGAAAG TCATCCACGA GCGTTTCGGC ATACACAGGG GCCTCATGAC CACGGTGCAC
TCCTACACCA ACGACCAGCG GATCCTCGAC CTGCCGCACA AGGATCCCCG CAGGGCAAGG
GCAGCGGCCC AGAACATCAT ACCGACGACG ACGGGGGCGG CGAAAGCCTT GTCGCTCGTC
ATCCCGGGCA TGGAGGGCCG GTTCGACGGC TACTCCCTCC GGGTCCCGAC CCCCACGGTG
TCCGTGGTCG ATTTCACGGC CGTTCTCGAA AAGGAGACCG ACACCGAAAC CTTGAGGGCC
GTTCTGAAGG AAGCCTCCGA GAAAGAGTTG AAAGGAATTC TGCAGTGCTG TGAGGAGCCC
CTCGTCTCCA GCGATTTCAA GGGCAACCCT CATTCCTCCA TCGTGGATAT CGAGTTTACC
CAGGTCCTGG CAGGCAACAT GGCCAAGGTC GTCTGCTGGT ATGACAACGA GTGGGGATAT
TCCTGCCGCG TGGCGGACCT GGCCGATTAT ATCTGCCGCA AGGGAGGGTT CTGA
|
|---|
| Protein sequence | MLKVGINGFG RIGRQVIKAA MERHPDTLRV VAVNDLFDVQ TNARLFKHDT NYGLFAGSVE
ARGDDLLVNG SPIRSFAERD PAMIPWDDLQ VDLVVESTGI FTTGPKAAAH LEAGAKKVII
SAPAKQIDQT IVMGVNHEQY DPEKHRIVSN ASCTTNCLAP PVKVIHERFG IHRGLMTTVH
SYTNDQRILD LPHKDPRRAR AAAQNIIPTT TGAAKALSLV IPGMEGRFDG YSLRVPTPTV
SVVDFTAVLE KETDTETLRA VLKEASEKEL KGILQCCEEP LVSSDFKGNP HSSIVDIEFT
QVLAGNMAKV VCWYDNEWGY SCRVADLADY ICRKGGF
|
|---|
| |