Gene Sfum_1462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1462 
Symbol 
ID4461518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1812049 
End bp1813353 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content66% 
IMG OID639702230 
Producthypothetical protein 
Protein accessionYP_845587 
Protein GI116748900 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0027345 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGACGA GATCAAAATT CAACCCCGTC CTGATCGGAT TCCTTGTTCT TCTCCTTGCG 
GCTCCGTCCG TAGCCGTCGG ACAGGGCGCG GGAGCGTCGG GGGGATTCAG CCAGGAAGAG
CTGGACCAGA TGCTTGCTCC GATCGCCCTT TACCCCGATT CACTGCTCGC CCAGGTGCTG
GTCGCGGCGG CCTATCCCAT CGAAGTGGTG CAGGCGGACC GTTGGGTCAA GCAGAACAGG
AACCTCAAGG GAGAGCAGTT GAACGCCGCC CTGGACAAGA TGGACTGGGA CCTCAGCGTG
AAGGCGCTCG TGCCGTTTCC GGAGGTCCTC GCCATGATGA GCGAACAGCT CGACTGGACC
TCGAAACTGG GTGAGGCCTT CGTGGCGCAG CAGGCCGACG TCATGCAGAC CGTCCAGAAA
CTGCGCGGCA GGGCCAGGAA CCAGGGCAAC CTGAAGACCA CCAGGGAACA GAAAGTCGTC
GTTCAGGACC AGGCGATCGT CATCGAGCCG GCCAACCCCA CCGTGGTCTA CGTGCCGACT
TACAACCCGG CGGTGGTATA CGGTTCCTGG TGGGCTCCCG CTTATCCCCC GTATGCATAC
TACCCGGCCG GTGCGGCCTT CGCCGCCGGT GCGTTCGGGT TTGCCGCCGG AGTGGCGGTC
GGAGCGGCCT GGAACAACGG GTGGGGCTCG TGGAACTGGG GACATAATGA CGTCAACGTC
AACGTCAACC GGAACACGAA CATCAACCGC AACAACATTT CCAATGTCCG AACGGGCCAA
TTCCAACCGC AGGCCGAGCA TCGCAAAGGG GCGGCATACC GGAATGAAGC CAACCGGCAG
AAGTACGGCC AGAGAGGGGC GGGTTCCGCG GACAACCGGC GGGATTTTCG CGGCCATTCA
CAGGCCGGCG CTGGTAGAGG GCCCGGCGAT ATCGGCCGTC AACAGGGGGT CGGGGCCGGC
GACAGGGGCC GCCAGCAAGG AATCGGCGCA GGTGACAGGG GCCGCCAGCA GGCTGGGCAG
CGCCCGTCCA CAAGGCCCGG CGGAGAATCG ATGCGCGGAC CGGCGCAGCA GCGACCGTCC
GGAGGAGCCT TCGACGGCAT GGGGAACAGC AGGCAAACCC GAATGAATGC GGATCGCGGT
CAAATGAGCC GCGGGATGGC CTCCGGTTCC TACCGTGGCG CCGGCTACGG CGGCGGCGGT
CGCGGAGGCT CCAGCTTCAG CGGGGGCCGT GGCGGTGGCT ACGGCGGCGG CGGCGGTCGG
GCAGGCGGAG GAGGCCGGGG AGGCGGTCGT GGAGGTCGCC GGTAG
 
Protein sequence
MMTRSKFNPV LIGFLVLLLA APSVAVGQGA GASGGFSQEE LDQMLAPIAL YPDSLLAQVL 
VAAAYPIEVV QADRWVKQNR NLKGEQLNAA LDKMDWDLSV KALVPFPEVL AMMSEQLDWT
SKLGEAFVAQ QADVMQTVQK LRGRARNQGN LKTTREQKVV VQDQAIVIEP ANPTVVYVPT
YNPAVVYGSW WAPAYPPYAY YPAGAAFAAG AFGFAAGVAV GAAWNNGWGS WNWGHNDVNV
NVNRNTNINR NNISNVRTGQ FQPQAEHRKG AAYRNEANRQ KYGQRGAGSA DNRRDFRGHS
QAGAGRGPGD IGRQQGVGAG DRGRQQGIGA GDRGRQQAGQ RPSTRPGGES MRGPAQQRPS
GGAFDGMGNS RQTRMNADRG QMSRGMASGS YRGAGYGGGG RGGSSFSGGR GGGYGGGGGR
AGGGGRGGGR GGRR