| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1458 |
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| Symbol | |
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| ID | 4460596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1807233 |
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| End bp | 1808501 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639702226 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_845583 |
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| Protein GI | 116748896 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.235103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000537348 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGAGATG AAAAACGATT TGGAGTGCAA CGCTCGGGGA ATGTGCGGCG CCTGTTCCGT
CTGTTGCTCG CGGGGAAGAT GTTCCCGGGG GTCCTGCTGG CCGCCGCCGG GGCTCTTCTC
GCTGCCGGGC TGGGGGAGAA GGTGCCGGCA CAGACCGCTT CCGTCCCTGA GGTCGAGGTC
GTGACCGTCA TTCAGAAGGA CGTGCCCGTC TTTTCGGAGT GGGTCGGCAC CACCGAGGGG
CTGGTGAACG CGAAAATCAG GGCCCAGGTG ACCGGCTACC TCGCCGCTCA GAACTACAAG
GAAGGCACAT CGGTGAAGAA GGGCGATCTG CTCTTCGAGA TCGATCCCCG GACGTTCAAG
GCCGCCCTGG ACCAGGCCCA GGCACAGCTG GCCATCGCTA AGGCCAGGCT GGGCAAGACC
GAGCTGGATG TGAAGAGATA CCGGCCGCTC GCAAAGGAAA GCGCCATCAG CCAGCAGGAA
CTCGATGACG CCGTGCAGGC CAACCTCGCC GCCAAAGCCT CGGTGCAGTC GGCAGAGGCG
TCGGTCGAGC AGGCCAGGCT GAGCCTGAGT TTTACGAGGA TTACTTCGCC CGTCGACGGC
ATCGCCGGCA GCGCCAACGC GCAGGTCGGC GACCTGGTCG GCCCGACACA GACGGGCGAC
CTGACAACGG TATCCACCGT CGATCCCATC AAGGTCTATT TCCCCATCAG CGAGCAGGAA
TACCTGTCGC TGGCCCGGGA CATGATCAAG ACCGGGGGCA AACCCGAGGG CCGCGCCAAG
GATCTCGAAC TGATCCTGGC CGACGGCAGC GTTTTTCCTC ACAAGGGGGA GGTTTCCTTT
GCCGAGCGGC AGGTGGACGT GAAGACCGGC ACGATTCGGA TTGCGGTCGT TTTTCCCAAT
CCCCGGAATC TCCTTCGCCC GGGACAGTTC GGCCGGGTTC GCGCCGTTTT GGACGTTCGG
AAGGGAGCCC TAATGGTTCC CCAGAGGGCG GTCCTCGAGC TCCAGGGAAG CTACCGGGTC
GCGGTGGTGG GGCCTGACAA CAAGGCCGCC ATTCGACCGG TCAAGACAGG CGAGCGCGTG
GAGAACATGT GGGTCATCAC CAGCGGCTTG AACCCCGGGG AGCGCGTCGT GGTGGAGGGC
ATCCAGAAGG TCAGGGACGG CATGCCGGTC ACTCCCAAGG CCGTGGACGC CGAATTCAAG
CAACAGCCGG GGTCCTCCCC TAAGCCTGAA ACAAAGGCAG CGGAACCCGC GGCCCCCAGG
AAGGATTAG
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| Protein sequence | MRDEKRFGVQ RSGNVRRLFR LLLAGKMFPG VLLAAAGALL AAGLGEKVPA QTASVPEVEV
VTVIQKDVPV FSEWVGTTEG LVNAKIRAQV TGYLAAQNYK EGTSVKKGDL LFEIDPRTFK
AALDQAQAQL AIAKARLGKT ELDVKRYRPL AKESAISQQE LDDAVQANLA AKASVQSAEA
SVEQARLSLS FTRITSPVDG IAGSANAQVG DLVGPTQTGD LTTVSTVDPI KVYFPISEQE
YLSLARDMIK TGGKPEGRAK DLELILADGS VFPHKGEVSF AERQVDVKTG TIRIAVVFPN
PRNLLRPGQF GRVRAVLDVR KGALMVPQRA VLELQGSYRV AVVGPDNKAA IRPVKTGERV
ENMWVITSGL NPGERVVVEG IQKVRDGMPV TPKAVDAEFK QQPGSSPKPE TKAAEPAAPR
KD
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