| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1456 |
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| Symbol | |
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| ID | 4460594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1802615 |
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| End bp | 1804057 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639702224 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_845581 |
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| Protein GI | 116748894 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000857275 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAAGGC TTGCAAGGAA ACTGATCCTC GCGGTTCTTC TGGTCTCTTT CGCATCCGGC
TGTGCGCTCG GCCCCAATTA CAAGCGGCCG GCGGTCTCCG CCCCGGAAAA CTTCAGAAGT
GCGCTGACTC CGGCTGAGCA GGCCTCGCTG GCCGATCTCC CCTGGTGGAC GATTTTCCAG
GACGAGACCC TTCAGAAGCT CATCACCGAA GCGCTCGAAA ACAACTACGA CCTGCGCGTG
GCGGTGACCC GCGTCGAACA GGCCCGCCAG ATCGCCGCCC AGGCCCGATC CCTGTTTTTC
CCGCAGATCG GCTACGACGG GGCCGTTGCG ACGGGCAGAA ACAGCTTTCT CACCTCCCCC
AGCCCCAACG GGGGCCAGAC AACGGATTCC GCCCTCCTGG ATCTGAGCGT TTTCTGGGAA
GTGGACCTGT GGGGCCGCAT CCGCCGCCTG AACGAGGAGG CCCGGGCGCA GTTCCTTGCC
ACCGACGAGG CGCGCCGGGG AGTCGTGGTC TCTCTTGTGA GCAGCGTGGC ACAGGCCTAC
TTCGAGTTGC TGGAACTGGA CCTGGAGTTG GAGATCGCCA GGCGGAACAC GAAATCCTTC
GAGGATACGT TGACGCTCTT CAGCCGGAGG CTTGAATACG GTGTGGCCTC CAAGCTGGAA
ACGTCGAGCG CCGAGGGGTT GCTGGGCACG GTGGCCGCCA ACGTTCCGGA ACTCGAACGC
CAGATCGTGA TCAAGGAAAA CCAGATCAAC GTCCTGCTCG GGCGCAATCC CGGCCCCGTG
GAGCGCAATG CCGACCTGCT CGATCAGGAA AGCCCGCCTG AGATTCCCGC GGGGCTGCCT
TCGGCGTTGC TCGAACGTCG ACCCGATATC CGGCAGGCGG AACAGAACCT GCGCGCCGCC
AATGCCCGGG TCGGTGTCGC GGTGACGAAC TTTTTTCCCC AGATCGGCCT CACCACGCTG
CTCGGCAAGG TCAGCCCGGA GCTGTCGGCT TTTTCGGCCG GGACCGCGAA TCTTTGGGCC
GTCGCGGGGA CCATGACGGG TCCGATATTC CGGGGCGGCG CGCTGGTCGC CGAATATCGG
CAGGCCAAAG CAGCCTGGGA GGAAGCCCGG CTGACGTACG AGCAAACGGC GCTCAACGCC
TTCAAGGAAG TGTCCAACGC CCTCATCTCC CGGGAAAAGC TCGAATTGGC CCGCGCTCAG
CAGTCCCGCT CGGTGAAGGC ATACGACCAG GCCGTCGGCG TCTCCCTCAA GCGCTACGTG
GCCGGAAAGG CGAGCTACTA CGAGGTGCTT CAGAACCAGC AGAACCTTTT TCCGGCTGAA
ACCACTCTTG CACGCACCCA GCTGAACCAG TTGCTCGCAG TCGTCCAGCT CTACAAGGCC
CTCGGCGGCG GATGGAGGGA AAACGAGATC GCGGCCGCGC GGACGCAGGG AGGCCATCCG
TAG
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| Protein sequence | MERLARKLIL AVLLVSFASG CALGPNYKRP AVSAPENFRS ALTPAEQASL ADLPWWTIFQ
DETLQKLITE ALENNYDLRV AVTRVEQARQ IAAQARSLFF PQIGYDGAVA TGRNSFLTSP
SPNGGQTTDS ALLDLSVFWE VDLWGRIRRL NEEARAQFLA TDEARRGVVV SLVSSVAQAY
FELLELDLEL EIARRNTKSF EDTLTLFSRR LEYGVASKLE TSSAEGLLGT VAANVPELER
QIVIKENQIN VLLGRNPGPV ERNADLLDQE SPPEIPAGLP SALLERRPDI RQAEQNLRAA
NARVGVAVTN FFPQIGLTTL LGKVSPELSA FSAGTANLWA VAGTMTGPIF RGGALVAEYR
QAKAAWEEAR LTYEQTALNA FKEVSNALIS REKLELARAQ QSRSVKAYDQ AVGVSLKRYV
AGKASYYEVL QNQQNLFPAE TTLARTQLNQ LLAVVQLYKA LGGGWRENEI AAARTQGGHP
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