Gene Sfum_1450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1450 
Symbol 
ID4460588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1796508 
End bp1796840 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content52% 
IMG OID639702218 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_845575 
Protein GI116748888 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000575333 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000561539 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAACCATA AGCAAAGAAG CGCTTATGCG AGTATTTGTG TGGCCAATAT GGCCTGCAAT 
GTCACAGAAG ATGATTTGAC GGCACTTTTT CCCAGTTCCG GAAAAGTACC TTCCGCGAAC
ATCGTCAAGG AAGGACATTC GGGACGGTCA AAAAAGTTTG GGTTCGTTAA AATGCCGTCC
GATTCGGAAG CGGACAAAGC GATGAAGGCC TTGAACGGGA AACGGCTCAA AGACCAGCCA
GTAGAGGTGA GTCGAGCCAA GCTCCCGGCG AACCGATCGC GGCGTGGACC GGGATATCGG
CGCCTGAGGC GCTTTTTGGC CAATTCAAGA TGA
 
Protein sequence
MNHKQRSAYA SICVANMACN VTEDDLTALF PSSGKVPSAN IVKEGHSGRS KKFGFVKMPS 
DSEADKAMKA LNGKRLKDQP VEVSRAKLPA NRSRRGPGYR RLRRFLANSR