| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1447 |
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| Symbol | |
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| ID | 4460585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1791700 |
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| End bp | 1794786 |
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| Gene Length | 3087 bp |
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| Protein Length | 1028 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639702216 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_845573 |
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| Protein GI | 116748886 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.722583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000177894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGATGTGGT ACCGGACAGA ACGACCGATA TGGCTCCGCC TCGGGGTAGG AGTTCTTCTC
CCCGTCATTG CTGCCGTCAT CCGGTGGCAC TTCCTCGAAA CTCTCGGGTT CCGCGCCACC
TTTACCACCT TTTACCCGGC CGTCGCAGTC GCTGCACTGT ATGGAAGATT CGGCGCCGGT
TTCATCGCGA CAGCTGTCTC GGCCCTCCTT GCAGACTATT TCTGGATTGA GCCGGTTGGT
CAGTTCGCCA TTGCTCCCTT CGCAGACCGG TTGAGCGTTG CGGTCTTTTT AGCCAATGGG
ACCTTGATCT CCTGTTTGGC CGAAGCGGCA TATCGTGCCC AGGCCCGGGC ATTCAAAACG
GAGCAGCAAT CGAGGCTCTC CGCCGAGCGC GAAAAGGCGG CTGTCGAGCT CCAGCAAAGT
GAGAGGAAGT ACCGCGAGTT GGTACAAAAT GCTAACAGTG CCATTGTCCG CTGGAACAGT
GGCGGCACGA TCGCCTTTTT CAATGAATAC GCTCAAACAT TTTTCGGCTA TCGTGAAGAT
GAAATCCTCG GCAAGCACGT GAGTGTCCTG TTGCCTGAAA CGGAGTCCGC CGGAACGGAT
TCGACTGCAC TTGCCCTTGA TGTGGTAAGA TATCCGGAAC GCTACGTTTC AATCATCAAC
GAGAATATCC GTCGGGATGG CAGCCGAGTA TGGATGGCAT GGACCCACAA AGCCATATTC
GATGAGAGCG GCGCCGTTTC GGAAATCTTG GCGGTCGGGA CTGATATCAC TGCGCGCAGA
CAGGCCGAAG AGAAACTGAA ACACGCCAGT GAGTTTGCCA CGGCCATTCT TGATACAGTT
GACGGACTGA TCATAGTACT CGATCGGAAT GGTCGAATCG TCCGATTCAA TGCTGCCTGT
GAACGCCTGA CCGGCTGGCG GGTCGACGAG GTGATTGGGC GATGCTTTTG GGAATTCCTG
GTTCCGGAGG AACAGCGTCG CGGTGTTCTC CAAGTATTTC AAGGTCTGAC CACGGGGAAA
TTCCCCAGCC GTCACGAGAA TGAATGGATT CTCCGGGATG GGAGTCGACG TTGGATAACC
TGGGCCAACT CTTGCCTGTT GGATGCGAAA GGTGACATCG TGCATGTTAT AGGTACCGGG
ATCGACATTA CCGAACGCCA ACGGGCTGAA CAAGCACTGC GCGAAAGCGA GAGACTGGCG
CGGGACCAGG AAGCTCAAAT AATGGCAATC TTGGATGCAG CCCCCGCCAT GATCTGGACT
GCTCATGACA GGGAGTGCCG GAGCATATCG GGGAACCGGG CGGCACGTGA GTTGTCACGA
GTGGACGAGA CCGCCAATAT GTCCAAAACC GGGCCGGAGC GAGAGCATCT TGCCCACTAC
AGCATCTACA AGGATGGCAG GGAGCTCGCT CCCGAAGAGC TGCCGATCCA GGTTGTTGCG
TCCACAGGTC GGGAGTTCAG AGACTATTCC CTCGAGTTTG TTTTGAAGGA TGGTCCACGA
TATTCGCTCC TGGGCAACGT CATCCCCCTC ATCGACTCGG AAGGCAGCCC GAGCGGCGCG
ATCGCCGCCT TCATGGACAT CACCGAACGA AAGCTGATGG AAGAGGAGCT TCGCAAATCG
AGGGATGAGC TCGAAATCAG AGTCCGCGAG CGAACGGAGG AACTGGCGGC GGAACGGCAG
CTGTTTTTCG ATGTCCTGGA GACACTCCCG GTCTATGTTT GTCTTCTGAC ACCCGAATAT
CATGTTCCTT TCGCTAATAA AGTCTTTCGT GATCGTTTTG GCGCATCCAA GGGCCTTCGC
TGCTTTGAAC ATCTGTTCGG GCGCAGCGAA CCTTGTGAAA TTTGTGATAC ATATGCGGTT
CTGAAGACTT CCACTCCCCA CCGTTGGGAG TGGGAAGGCC CCGACGGCCG CAGCTATTCC
GTCTTCGACT TCCCATTCAT CGACGCCAAG GGTTCCCAAT TGATCCTTGA GATGGGAATT
GACGTCACCG AGCGCAAGCA GGCCGAGGAA GCACTAAAAA CCGAGAGGCA GCGGCTCTTT
GACGTGCTTG AGACATTGCC GGTAATGATC TGCCTATTGA CGCCTGACCA CCATGTCGCT
TTTTCAAACC GCAGCTTTCG CGAGAAGTTT GGCGAATCGC AGGGACGGCA CTGCTACGAA
TACCGTTTCG GGCTTAACGA ACCCTGCAAT TTTTGCGAAT CGTACAGAGT GGCGGAAACG
GGCCGGTCTC ACCACTGGGA AGTGACCGTC CCCGACGGCA CCATAATCGA TGCTCACGAC
TTTCCGTTCA TCGACGTGGA CGGCTCTCCC ATGATCCTTG AAATGGACTT CGACATTACG
GAGTTCAGGG AAGCCGAAAG GGAACTCAAA GCGACAGTGG CCAAGCTCGA ACAGTTGAAT
CAGGAACTGC AGGAATTCGC TTTTATCGCT TCCCATGATC TTCAAGAACC CTTGAGAAAG
ATCCAGACTT TCGGAGAAAT GCTTGTTAGA AGAAAGAAGG ATTCCCTCGA CGCCGAAGGC
AAAAACCTCT TGGAGCGAAT CATAAAGGGC GCAAACCGTA TGGCTGAGCT TCTACATGCC
CTGCGCACAT ACTCCAGAAG CGGCACAAGC CAGTTGATTC ATAAGCCCGT GTCCCTTTCA
GAGGTTGCCA GGGGGGCCGC GAGTGCCTTG GAATATTGGA TTTCCAAGAC CAATGCGAAG
GTGGAGATTG GTGACCTGCC GACAGTCGAT GCCGATGAGT CGTTGCTACA TCAGCTTTTT
CAAAACCTGA TCTCGAATTC AATAAAGTAC CGAAAGGAAT CGGAACCCCC TGTTATAAAA
ATTTCCGGGA GTGTGATCGA TCACCAATGC CGGATAAGCG TACAGGACAA CGGCATAGGG
TTCGATCCGT GCTACTCCGA TCAAATCTTC AAGCCTTTCC AGAGGCTTCA CGGCAAGGAT
TCGCCATATA GCGGCACCGG AATGGGTCTT ACCATTTGCA GGAAAATTGT GGCCAGGCAT
AATGGCGAAA TCACCGTCGA GAGCGAACCC GGGCGAGGCT CCACTTTCAA AGTGACCCTT
CCTTTGAAGC AGCAGAAAAG GGCCTGA
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| Protein sequence | MMWYRTERPI WLRLGVGVLL PVIAAVIRWH FLETLGFRAT FTTFYPAVAV AALYGRFGAG
FIATAVSALL ADYFWIEPVG QFAIAPFADR LSVAVFLANG TLISCLAEAA YRAQARAFKT
EQQSRLSAER EKAAVELQQS ERKYRELVQN ANSAIVRWNS GGTIAFFNEY AQTFFGYRED
EILGKHVSVL LPETESAGTD STALALDVVR YPERYVSIIN ENIRRDGSRV WMAWTHKAIF
DESGAVSEIL AVGTDITARR QAEEKLKHAS EFATAILDTV DGLIIVLDRN GRIVRFNAAC
ERLTGWRVDE VIGRCFWEFL VPEEQRRGVL QVFQGLTTGK FPSRHENEWI LRDGSRRWIT
WANSCLLDAK GDIVHVIGTG IDITERQRAE QALRESERLA RDQEAQIMAI LDAAPAMIWT
AHDRECRSIS GNRAARELSR VDETANMSKT GPEREHLAHY SIYKDGRELA PEELPIQVVA
STGREFRDYS LEFVLKDGPR YSLLGNVIPL IDSEGSPSGA IAAFMDITER KLMEEELRKS
RDELEIRVRE RTEELAAERQ LFFDVLETLP VYVCLLTPEY HVPFANKVFR DRFGASKGLR
CFEHLFGRSE PCEICDTYAV LKTSTPHRWE WEGPDGRSYS VFDFPFIDAK GSQLILEMGI
DVTERKQAEE ALKTERQRLF DVLETLPVMI CLLTPDHHVA FSNRSFREKF GESQGRHCYE
YRFGLNEPCN FCESYRVAET GRSHHWEVTV PDGTIIDAHD FPFIDVDGSP MILEMDFDIT
EFREAERELK ATVAKLEQLN QELQEFAFIA SHDLQEPLRK IQTFGEMLVR RKKDSLDAEG
KNLLERIIKG ANRMAELLHA LRTYSRSGTS QLIHKPVSLS EVARGAASAL EYWISKTNAK
VEIGDLPTVD ADESLLHQLF QNLISNSIKY RKESEPPVIK ISGSVIDHQC RISVQDNGIG
FDPCYSDQIF KPFQRLHGKD SPYSGTGMGL TICRKIVARH NGEITVESEP GRGSTFKVTL
PLKQQKRA
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