Gene Sfum_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1446 
Symbol 
ID4460584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1791239 
End bp1791700 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content48% 
IMG OID639702215 
Productresponse regulator receiver protein 
Protein accessionYP_845572 
Protein GI116748885 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0006 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATAAAA AGCGAGCTCG TTTTCTTGTC CTTGTGGCCG ATGATGACGA GGACGATTGC 
TTTCTTCTGG AAGCAGCGTT TCAAGAAATG GGCAACCGCT ATGATTTGCG GTTTGTGGAT
GATGGGCGGG ACCTCCTCGA TTACCTCTAC CACAAGGGGA ATTTCGCAGA CCCCGTAAGA
TATCCCCGAC CTGATTTGAT CCTTCTCGAT TTGAATATGC CGCGAATCGA TGGCCGCAGC
GCACTGCGAA TCATCAAGGC AGACCAAAAA CTAAGCACGA TTCCAATCTT GATTTTGACG
ACATCGAAGG AGCAACAAGA CATCGAATTA ACAAAGAAAG CCGGCGCTTC CTCCTTTCTC
GCTAAACCGA ACGGATACGA CGCATTGAAA AAGATGCTTG AAGAGTTCTG CACGGCAATT
CTTCACGATC CGAACATTCC CTTCCAAGTA GTCGGCTGTT GA
 
Protein sequence
MDKKRARFLV LVADDDEDDC FLLEAAFQEM GNRYDLRFVD DGRDLLDYLY HKGNFADPVR 
YPRPDLILLD LNMPRIDGRS ALRIIKADQK LSTIPILILT TSKEQQDIEL TKKAGASSFL
AKPNGYDALK KMLEEFCTAI LHDPNIPFQV VGC