Gene Sfum_1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1439 
Symbol 
ID4460491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1785850 
End bp1786431 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content57% 
IMG OID639702208 
Productprotein of unknown function SprT 
Protein accessionYP_845565 
Protein GI116748878 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000676682 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGAAA CATCCTGCAA CGCAGCAAAA GGGTGCTTGA TGTCTGAATC CGGCGAAAGA 
CTTGAATTGC CCCCGCCACT TCGCTCTCTT CTGGAGCCCA TGAGACGATG GCTCCACCTT
TGGGGACTAC CGGGGCTCGA CCAGCATATT TCAATAGGTT TCAGTGCACG GCTTCGGCGT
GCGCTCGCTC GATGCTATCC GAGGCGGCGC CGGGTCATTC TCGCCGCGAG CTTGCAGGAG
GCCTCTCCTC TTCTGGAAGA GGTTCTCTGC CACGAGTGTG CTCATCTAGC GGCATACGAA
CTCTACGGCG ACGCCTGCAA ACCGCACGGT CCTGAGTGGG CCCGGCTCAT GGAATCGGCA
GGCTTCACAC CACGTAGGCG CGTAGTGCTC AGCAAATCAG AAATTATCCC GGGAAAGGGC
CGTCGCCAAT ATGTTTACAT CCATTCCTGC CCGGTTTGTC AAACCCAGCG TACAGCCCGC
CGTGCAGTCG GCACATGGCG ATGCCCTTGC TGCACGGAAT TGGGACTCGA TGGTCTGCTT
GAGATTTCAA AACGCTTGGT ACGTGATGAG GGTGAATCAT GA
 
Protein sequence
MSETSCNAAK GCLMSESGER LELPPPLRSL LEPMRRWLHL WGLPGLDQHI SIGFSARLRR 
ALARCYPRRR RVILAASLQE ASPLLEEVLC HECAHLAAYE LYGDACKPHG PEWARLMESA
GFTPRRRVVL SKSEIIPGKG RRQYVYIHSC PVCQTQRTAR RAVGTWRCPC CTELGLDGLL
EISKRLVRDE GES