Gene Sfum_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1425 
Symbol 
ID4461361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1766198 
End bp1766488 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content53% 
IMG OID639702193 
Producthistone family protein DNA-binding protein 
Protein accessionYP_845551 
Protein GI116748864 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00988] integration host factor, beta subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.589972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.158617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAGA GCGAACTCAT CGAAACGTTG GCCAAGGCCG AAGGAATCAC CCTGAAAGCT 
GCCGAGACGG CCGTCAACGT TGCATTCCAG AGCATGGAAA ATGCTCTCAT TCGGTCGGAT
CGCCTGGAAA TCCGCGGCTT TGGAAGCTTT AAGGTCAAGA ACTACGAAGG CTATAAGGGC
AGGAACCCCA AAACCGGTGA GCTCATAGAA GTCAATTCCA AGAAGCTGCC GTTCTTCAAG
GTGGGCAAGG AGCTCAAGGA GCGCGTAAAC GGCTCCGAAG GCGAGTCGTA A
 
Protein sequence
MTKSELIETL AKAEGITLKA AETAVNVAFQ SMENALIRSD RLEIRGFGSF KVKNYEGYKG 
RNPKTGELIE VNSKKLPFFK VGKELKERVN GSEGES