| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1404 |
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| Symbol | |
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| ID | 4461599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1744795 |
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| End bp | 1746840 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639702172 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_845530 |
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| Protein GI | 116748843 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0277011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAC CGGCAACCCG TTTCCATAAT CGCATTTATG ACTCGCCCGT GGGCAAAATC
GCCATTTTGA CCATGGACAA CGGTCAAGAC TACAAACGCC CGAACACCTT CGGCGAAGCA
GCCATGATGT CGCTCAACCA GGCATTGGAC GAAGTCGTTC GAACGCCGGG TGTCAAGGGC
ATGATGCTCA CCGGCAAACC ATACATTTTC GCGGCTGGAG CGGACCTGAG CGAGATTCCT
TTCATCACGA CGTTCGAGCA GGGCTATCAG ATCGGCAAGC TCGTCCACAC CGCCATGAAG
CGCATCATGG ACCTCCCCTT CCCCACGCTC GCCGCCATAA ACGGAGTAGC CCTGGGCGGA
GGACTGGAAA TTGCACTCTA CTGCACCTGC CGCACCGTAT CGAAAAGCGC CCAGGGCATC
GGCTTCCCGG AGTGTTTCCT GGGGCTCGTT CCCGGATGGG GAGGCTGCAC CCTCGCAACC
CGGCTGATCG GACCGGAAAA GACCCTGCAG CTCATCATCT ACAACGCGCT GAACCAGAAC
CGGATGATCA ACGGTCCCCA GGCATACGAA CTGGGACTGG CGGACCGCCT GTTCGACGGG
GCCGAATTCC TGGATGATTC CCTGCGCTTT CTCATGGACG TCATTTCCGG CGGCGTCAAG
GTGGAAAGAA CCCCTCCACC CGCCGTCGAC GCCGGGACCG CCCTCGCCAG GGCGCGCGCT
TTTGTCGACG GCAGGGTCCA CGGCGCCGCA CCCGCTCCCT ACAAGGCGAT CGAGCTTATC
GAAGGGGCCC TGAAAGGAAG CGTGGAGCAG GGATTCGAGG AAGAAAACAA AGCCCTGGGC
GAATTGATCA AGTCGCGCCA GTGCAAGGCG TCCATCTACT CCTTCGACCT CGTGAACCGA
TACGCGAAAA GACCGGCGGG CATTCCCGAC GCGAAACCCG GGGCGATCGC CAAGGTGGGC
ATTGTCGGCG CCGGACTGAT GGCTTCGCAG CTCGCGCAGC TCTTCATCGA ACGGCTCGAG
GTGCCGGTGG TGATGAAGGA CATCAGCCCC GAAGCCCTGG AAAAAGGCTG CGGCCAGGTG
GTCGAAGGAT TTCGCAGGCT GGGGGAGAAA GGCAAGCTGA CCGAAGGCAA GGCACGCCAC
CTCGCCGGCC TGGTGAGCGG GACGCTTGAT TTTCGGGACT TCTCCGATTG CGACTTCGTC
ATCGAAGCCG TTTTCGAGGA AATGGCCGTG AAGAAGCAGG TCCTCGGCGA GCTCGAACCA
TTGCTGCGAC CCGACGCCGT CATCGCCACC AACACCTCCT CGCTCAGCGT CACCGAAATG
GCATCCGTCC TCAGAGTTCC GGGCAGGATG CTCGGATTTC ACTTCTTCAA CCCGGTCGCC
GTCCTGCCGC TCGTGGAAGT CATAAGGACC GCCCAGACGA GCGGCGAAGC CCTGGCCACG
GCTTTCGACC TGGCCCGCAA ACTGCGCAAG ACCGGTGTGC TCGTCAAAGA CGCCCCTGCC
TTCCTGGTCA ATCGCATTCT GGTCAAGATG CTGGTCGATT GCCTGGCTCT GGTGGACGAA
GGCGCCTCCT TTCAGGAGGT GGACGACGCA CTCCTGGCTC TGGGCCTGCC CATGGCCCCC
TTCGACCTGC TGGCCATGGT GGGCATGCCC GTCGCCCTTC ATGTCATGGA AACCCTCAAC
CATGCCTTGG GACCCGACCG TTTCCCTCTG AACGCCAATT TCAGCAGGAT CGTCGAAGCG
AAGAAGACGT TCGTGTACCT GCCCGGAGTG GAGCCCAAGC GGGTCGATCC CGACCTGGAA
CGCCTGTGGG CGAAGACCGG CGAAACCGCC TTCCATCCCG AGGAAATCCG GGAGAGAGTG
CTCAGCAGCC TCGCCCGGGA AACCGATCTC ATATTGAAGG AAAAGGTTGT CGGGAGTTCC
AAGGACATCG ATCTCGCCAT GATCATGGGT GCCGGATGGC CGTTTTTCAT GGGCGGGCTG
ACCATGTACC TGGATCTGGC CGGGATCACT CCGCGTGTGC TGCAGAAAGT CTTTTTCAGT
TTCTAG
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| Protein sequence | MAEPATRFHN RIYDSPVGKI AILTMDNGQD YKRPNTFGEA AMMSLNQALD EVVRTPGVKG
MMLTGKPYIF AAGADLSEIP FITTFEQGYQ IGKLVHTAMK RIMDLPFPTL AAINGVALGG
GLEIALYCTC RTVSKSAQGI GFPECFLGLV PGWGGCTLAT RLIGPEKTLQ LIIYNALNQN
RMINGPQAYE LGLADRLFDG AEFLDDSLRF LMDVISGGVK VERTPPPAVD AGTALARARA
FVDGRVHGAA PAPYKAIELI EGALKGSVEQ GFEEENKALG ELIKSRQCKA SIYSFDLVNR
YAKRPAGIPD AKPGAIAKVG IVGAGLMASQ LAQLFIERLE VPVVMKDISP EALEKGCGQV
VEGFRRLGEK GKLTEGKARH LAGLVSGTLD FRDFSDCDFV IEAVFEEMAV KKQVLGELEP
LLRPDAVIAT NTSSLSVTEM ASVLRVPGRM LGFHFFNPVA VLPLVEVIRT AQTSGEALAT
AFDLARKLRK TGVLVKDAPA FLVNRILVKM LVDCLALVDE GASFQEVDDA LLALGLPMAP
FDLLAMVGMP VALHVMETLN HALGPDRFPL NANFSRIVEA KKTFVYLPGV EPKRVDPDLE
RLWAKTGETA FHPEEIRERV LSSLARETDL ILKEKVVGSS KDIDLAMIMG AGWPFFMGGL
TMYLDLAGIT PRVLQKVFFS F
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