| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1403 |
|---|
| Symbol | |
|---|
| ID | 4461598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 1743575 |
|---|
| End bp | 1744768 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639702171 |
|---|
| Product | acetyl-CoA acetyltransferases |
|---|
| Protein accession | YP_845529 |
|---|
| Protein GI | 116748842 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.485333 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCGA GGGATGTGGT GGTCATTGAC GGAATCAGGA CCGCGTTCGG TCGGGCCGGC
GAGAAAGGCT ATTTCTGGCT GACGCGGGCC GACGATCTGG TGGTTAAATT GATACGGGAG
CTGCTCAGGC GAAATCCCCT GGTGACTCCG GACATGGTCG AGGAAAACGT CTGGGCCGCC
ACCACCCAGG AGGGAGACCA GGGCCTTACC ATGGGACGCA CCACGGTGCT TCTGTCGGGG
TTGTCCGATT CCTGCGCCGG CTTTTCGGTG GACCGCATGT GCGCGGGAGG ACTGACCGCG
GTCACCGCGG CGGCGTCGGA AATCGCCCTT GGAGCCTGCG ATGTGGCCAT TGCGGGCGGG
GTCGAGCACA TGGGACACCA TCCCATCGCT GCGACCGCAA CCCCCAACCC GCGCTTCCTC
GCCGAGAAAA TCGTCTCCGA AGACGCGCTG GTGATGGGCA GGACGGCCGA ATGTCTTCAC
GACATGTTTC CCGAGATCAC CAAGGAAATG GCCGACGAAT ATGCGTACCG CTCCCAGCTC
AAGACCGCCC GCGCCTATGC GGCCGGCAAG ATCGGCAAGA TGATCGTGCC GATGACCGTG
TACACCAGGG AAGGGTGGGA TGTCGCGGAC AGGGACCAGC AGCCCCGCCC CGAAACCACC
ATGGAGGCGC TGCGCGATCT CAAGACGCTC TTCCGCGCCC GGGGCAGAGT CACCGCGGGG
AACTCATCGG GGTTGAACGA CGGCGCCTCC GGGCTGCTGC TCACGAGCCT CGAGAAAGCC
AAAGAGCTTG GCCTTGCGCC GAAGATGCGC CTGGTCGGCT ACGCCTACAC CGGGGTCAAA
CCCGAAATCA TGGGTTACGG TCCGATCCCT TCCACGAAGA AGCTCTTCGC CAGGACGGGG
CTTTCCATGG ACGACATGAG CTTTGTCGAG CTCAACGAGG CCTTCGCCGT GCAGTGTCTT
GTTTTTATGA AGGAATTCGG GATGAAATTG ATGGATGACG AACGCCTCAA CCCGCTCGGC
GGCGCCATCG CCTTCGGCCA TCCGCTGGCC GGTTCCGGTC CCAGGCTGGT TCTGCACCTG
TTGCACCATT TCGCCGAGCA CCCCGAGGCG CGCTACGGCC TGACCGCGTT GTGCGTCGGA
CTTGGACAAG GCGCATCCGC CATTTGGGAA AACATGCAAA CCGAAGGCAG ATAA
|
|---|
| Protein sequence | MQARDVVVID GIRTAFGRAG EKGYFWLTRA DDLVVKLIRE LLRRNPLVTP DMVEENVWAA
TTQEGDQGLT MGRTTVLLSG LSDSCAGFSV DRMCAGGLTA VTAAASEIAL GACDVAIAGG
VEHMGHHPIA ATATPNPRFL AEKIVSEDAL VMGRTAECLH DMFPEITKEM ADEYAYRSQL
KTARAYAAGK IGKMIVPMTV YTREGWDVAD RDQQPRPETT MEALRDLKTL FRARGRVTAG
NSSGLNDGAS GLLLTSLEKA KELGLAPKMR LVGYAYTGVK PEIMGYGPIP STKKLFARTG
LSMDDMSFVE LNEAFAVQCL VFMKEFGMKL MDDERLNPLG GAIAFGHPLA GSGPRLVLHL
LHHFAEHPEA RYGLTALCVG LGQGASAIWE NMQTEGR
|
|---|
| |