| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1398 |
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| Symbol | |
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| ID | 4461593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1735304 |
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| End bp | 1736968 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639702166 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_845524 |
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| Protein GI | 116748837 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases
[COG0607] Rhodanese-related sulfurtransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00125379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.336053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCCG GAAAACGTAT CCTTATCGTT GGCGGTGTGG CTGGAGGCGC TTCGTGTGCG
GCACGGGCGA GAAGACTGTC GGAGGAAGCG GAAATCATCA TGTTCGAGAA GGGGCCGTTC
GTTTCTTTCG CCAACTGCGG CCTGCCCTTC CACATCGGGG ACGTCATCGA GAAGGAGGAG
GCGCTCATGG TGGCCTCGCC GCAACTGTTC AAGGAGCGCT TCAACGTCGA TGTGCGCGTC
AATTCCGAAG TCGTATCGAT CGACAGGCGG AACAGCGAAA TCGCGGTGAA AGACCTTTCG
TCGGGTGAGA CCTATACGGA GAAATACGAT GCGCTTGTTC TTTCCCCGGG TGCCGCCCCG
GTGAGGCTCC CCATCCCCGG GATAGACCTG CCCGGCGTCT TTACGTTGAG GAATATTCCG
GATACCAGGC GGATCAGGGA ATGGGTCTCG GCGAACGGTT CCAACCGCGC CCTGGTGGTG
GGCGGCGGCT TTATCGGGCT CGAAATGACC GAAAATCTGG TCAAGCGCGG ATTGACCGTA
ACCATCGTGG AGGCGCAGTC CCACGTTATG CCTGCGCTGG ATCCGGAAAT GGTTTCCCCG
GTGCACAGCG AGCTGAAACG CTGCGGGGTT TCGCTGCGCC TGGGAGAATC GGTCACCGGA
TTTCAGTCGA TGCCCGACGG GTCCATTCGC GCCGGTCTCG CATCCGGGGG AGAGGAACAG
GCCGATATCG TTATTGTCTG TGTTGGCGTG CGGCCTGAAA CGAAGCTCGC CCGTGAGGCC
GGGCTGGAAA TCGGCGAGCT TGGCGGCATA CGGGTGGACA GCCGGATGCG CACCAGTGAC
CCCGCGATCT GGGCGGTGGG AGATGCCGTC GAGGTGCGTG ATTTCATCAC CGGCGGGTGG
ACCCTCATCC CGCTTGCCGG GCCCGCAAAC CGCCAGGGCC GTGTCGCCGC CGACGTCATC
CTGGGCAGGG ACCGGGAGTT CAGGGGAGTT CAGGGAACGG CTGTCTGCGG GGTTTTCGAT
GTAACCGTCG CCTCCACCGG TCTCAGCGAA AAAACGCTGA AACGCCTGGG CCTCTGGAAA
CAGGATTACG AGAAGATCTA CCTGCATCCA GGGCACCATG CGTTGTACTA TCCCGGAGCC
AGGACAATCA GCCTGAAGCT GATCTTTTCC AAAAAGGACG GGCGGATCAT CGGATGCCAG
GCGGCCGGGA AGGAAGGGGT GGAGAAGCGG GTCGACGTCA TATCCATGGC GATCCAGTCA
AACCGGACGG TTTTCGATCT GGAGGAAGCG GAGCTTTGCT ACGCGCCTCA ATACGGTTCC
GCGAAAGATC CGGTCAATAT GGCGGGAATG ATTGCCGCCA ACGTGCTGCG CGGTGATTCG
AGCATCGCCC AGTGGGATGA GATCGCCTCG GCGGCCCCCT TTGTTCTCGA CGTCCGGGAT
GTCAAGGAAT TTGGCAAGGG CCATGTCGAG CAGGCGGTTA ACATCCCGTT GGACCAGCTT
CGGACAAGGA TGAACGAGGT GCCCGGGGAC CGCGATGTCT GGGCATACTG CCTGGTGGGG
CAGAGGTCCT ACTATGCGAT GAGGCTGTTG TCCCAGAACG GGTTCAACGT CAAGAGCATT
TCCGGGGGGT ACCGGACCTT CCTGGCCGCA AAGGGGGGCA AATAG
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| Protein sequence | MASGKRILIV GGVAGGASCA ARARRLSEEA EIIMFEKGPF VSFANCGLPF HIGDVIEKEE
ALMVASPQLF KERFNVDVRV NSEVVSIDRR NSEIAVKDLS SGETYTEKYD ALVLSPGAAP
VRLPIPGIDL PGVFTLRNIP DTRRIREWVS ANGSNRALVV GGGFIGLEMT ENLVKRGLTV
TIVEAQSHVM PALDPEMVSP VHSELKRCGV SLRLGESVTG FQSMPDGSIR AGLASGGEEQ
ADIVIVCVGV RPETKLAREA GLEIGELGGI RVDSRMRTSD PAIWAVGDAV EVRDFITGGW
TLIPLAGPAN RQGRVAADVI LGRDREFRGV QGTAVCGVFD VTVASTGLSE KTLKRLGLWK
QDYEKIYLHP GHHALYYPGA RTISLKLIFS KKDGRIIGCQ AAGKEGVEKR VDVISMAIQS
NRTVFDLEEA ELCYAPQYGS AKDPVNMAGM IAANVLRGDS SIAQWDEIAS AAPFVLDVRD
VKEFGKGHVE QAVNIPLDQL RTRMNEVPGD RDVWAYCLVG QRSYYAMRLL SQNGFNVKSI
SGGYRTFLAA KGGK
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