Gene Sfum_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1397 
Symbol 
ID4461592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1734849 
End bp1735196 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content61% 
IMG OID639702165 
Productcupin 2 domain-containing protein 
Protein accessionYP_845523 
Protein GI116748836 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0319163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.27943 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG TCCACTACTC GGAGGTTGAA GAAAAGGTGT TCGGCAGTCC GGCGAAGGGT 
GCGAGCGGAC GGGTGGTTAT CGGCAAGGCG GACGGCGCGG ACAATTTCTG CATGCGCGTG
ATAGAGCTGG CCCCCGGCGG ATACACTCCA CGTCACTCCC ATCCCTGGGA GCATGAACAG
TTCGTGCACG CAGGGCGGGG GACCATCCTG ATGGACAACC GGTGGTTTGA GTTCGGCCCG
GGGAGTGTCG TTTTCGTCCC CGCCAACGAG GAGCACCAGT TGAAGAACAC GGGGGAGGAA
CCTCTGGTCG TTGTCTGCCT GGTTCCACCT TTTGCCCCGG AGATCTGA
 
Protein sequence
MKIVHYSEVE EKVFGSPAKG ASGRVVIGKA DGADNFCMRV IELAPGGYTP RHSHPWEHEQ 
FVHAGRGTIL MDNRWFEFGP GSVVFVPANE EHQLKNTGEE PLVVVCLVPP FAPEI