| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1396 |
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| Symbol | |
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| ID | 4461591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1732680 |
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| End bp | 1734845 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639702164 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_845522 |
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| Protein GI | 116748835 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.814379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.333041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGAAC GGCCTTTCGG TTCCAAAGCC GATGCTCTTC CTGCCGCCGA TGGGGATATC
GAACGGCCGG AGCTTGCCGA CATCCTGGAT GTCCAGGAGG TCCAGGCGCT CGTGGATGAT
TTCTACGAGC TGACACGCTT TCCCGTGAGC ATTGTGGACC GCAAGGGCAA GGTCCTGGTC
GGCGTCGGAT GGAAAGACAT CTGCGTGCGG TACCACCGGG CCCATCCCGA GGCGTGCATG
CATTGCACGG AAAGCGACCT GGAGCTCTCG CAAGGCGTTT CACCGGGGGA TTTCAGGCTC
TACAAGTGCA AGAACAACAT GTGGGACGTT GCGACGCCCA TCATTGCGGG CGGCCGACGT
CTGGGGAATG TCATCTCCGG GCAGTTCTTT TTCGAAGACG AACCGCCGGA CCGCGAGGTC
TTCCGATCGC AGGCCAGGCA CTACGGGTTT GATGAAGAAG CTTACCTCGC CGCGGTTGAC
GATGTCCCGC GTTTCGAAAA GGACTTCGTG AGAAAGGGCA TGGCGTTCCT GGTCAAGCTC
GCCCGGATGC TGTCCCAGTT GAGCTACAGC AACATGCGGC TGGCCCGGTT GTTGACGGAA
CGCGCCGCGC TGACGGAATC GGTGCGCGAG AGCGAAGAGC GGCTCAATCT TGCTCTGGCC
GCATCGCGCA TCGGCGCCTG GGAATGGGAT GCACGAACCG ACACCGTGTA CTGGTCGCCG
GAGAGTCGAG CCATACTGGC CCTGGAAGGG AAAGGGGGGG CTCTTGAATC CTTCAGGAAG
GTCATCCATC CGGAGGACGT TGTCCGCGTC ATGGCAATGG CCGAACGCGC ACTGGCGGAA
AGAACGCCTT TCGTGGAGGA ATTTCGGGTC ATCCACCCCG CAGGCGGGAT CCGCTGGGTA
TCCAACCGCG GACGGGCCGA ATATGACAGA GCGGGGAAGC CGTTGCGGAT GGTGGGCACA
ATCCAGGACA TCACTGAGCG CAAGCGTGCG GAAGAAGAGC AGATCCGCGT CGAGGCGCGA
CTGAGGCAGG CTCAGAAGAT GGAAGCCCTG GGCACCCTGG CGGGGGGGAT CGCCCACGAT
TTCAACAATA TTCTCGGAAT CATCATCGGC TATTCGGAAA TGGCCCATTG GAACGCGGAA
GAAGGAAGTC CGATCCGTGA AGACCTGCAG CACGTTTTCA AGGCGACCAC CCGGGCACGG
GAACTGGTGC GGCAGATTCT GGCCTTCAGC CGCCGCGGCG AACAGGAGAA AAAACCCGTT
CAGATCGGGT TGATCGTGAA GGAGGCGATG CTGATGCTCC GCGCCTCGCT TCCATCGACC
ATCGACATGA AGATGGACAT CGCTTCCAAA TCGGTGGTGC TGGCCGATCC GACACAGGTT
CACCAGGTGC TGATGAACCT GTGCGCCAAT GCCGCCCACG CCATGCGCGA AAACGGCGGC
GTTCTGCAGG TGAGCCTCAC CGATGTCTCC ATCGGGCCGG ATTCGGTCCA TGTTCCATCG
GACCTCCGAC CCGGGCCTCA CGTGCAGCTC ACCGTGATGG ACACCGGGCC GGGCATTCTT
CCATCCGCTC TCGACCGCAT ATTCGATCCC TTTTTCACGA CCAAGGAACT GGGAGTTGGA
ACGGGACTGG GCCTTTCCGT GGTGCATGGG ATCGTCAGAA GCCATGGCGG GACGGTCTCG
GCGGACAGCA TCCCGGGTGA GGGGGCCGCT TTCCGCGTGT TGCTTCCCGC CATGGAGAGC
GTTCCGGGCC AGGATGCCGT GGCGGTTGCG TCCCCACCCC ACGGTCGGGA ACGGGTCCTC
ATCGTGGACG ATGAACCGGA ACTGGCCATA GTTACGAAGC GAATGCTCGA ATTTCTCGGA
TACGAGGTGG AATACCGCAC GAACGGCATC GAGGCGCTGG AGGCGTTCCG GCATCGGTCG
AAGGAGAACC CTTTCGATCT TGTGGTCACG GACCTGACCA TGCCTCATCT GACCGGAGAG
GACTTGGCAC GGGAGCTTCT GCGCCTCCAG CCGGATCTTC CCGTCATCTT GTGCACGGGT
TTCAGTGAAC GGATGGACGC CCGGAGAGCT CAACAGCTCG GGATTCGGGG CTTCATCATG
AAACCCGTGG TTGCCGGCGA GCTTGCCGGA ACGATCAGGC GAATCCTGGA CCAGCGGACG
CAGTGA
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| Protein sequence | MTERPFGSKA DALPAADGDI ERPELADILD VQEVQALVDD FYELTRFPVS IVDRKGKVLV
GVGWKDICVR YHRAHPEACM HCTESDLELS QGVSPGDFRL YKCKNNMWDV ATPIIAGGRR
LGNVISGQFF FEDEPPDREV FRSQARHYGF DEEAYLAAVD DVPRFEKDFV RKGMAFLVKL
ARMLSQLSYS NMRLARLLTE RAALTESVRE SEERLNLALA ASRIGAWEWD ARTDTVYWSP
ESRAILALEG KGGALESFRK VIHPEDVVRV MAMAERALAE RTPFVEEFRV IHPAGGIRWV
SNRGRAEYDR AGKPLRMVGT IQDITERKRA EEEQIRVEAR LRQAQKMEAL GTLAGGIAHD
FNNILGIIIG YSEMAHWNAE EGSPIREDLQ HVFKATTRAR ELVRQILAFS RRGEQEKKPV
QIGLIVKEAM LMLRASLPST IDMKMDIASK SVVLADPTQV HQVLMNLCAN AAHAMRENGG
VLQVSLTDVS IGPDSVHVPS DLRPGPHVQL TVMDTGPGIL PSALDRIFDP FFTTKELGVG
TGLGLSVVHG IVRSHGGTVS ADSIPGEGAA FRVLLPAMES VPGQDAVAVA SPPHGRERVL
IVDDEPELAI VTKRMLEFLG YEVEYRTNGI EALEAFRHRS KENPFDLVVT DLTMPHLTGE
DLARELLRLQ PDLPVILCTG FSERMDARRA QQLGIRGFIM KPVVAGELAG TIRRILDQRT
Q
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