| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1384 |
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| Symbol | |
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| ID | 4461238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1720484 |
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| End bp | 1721323 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639702152 |
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| Product | FliA/WhiG family RNA polymerase sigma factor |
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| Protein accession | YP_845510 |
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| Protein GI | 116748823 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGACT CAGCAGGAAA AAGAGATGCC ATGGAACCGA TGAGAAGCAT GACACAAAAC
CCATGTCCCA TTGAAGACGC CGGGGGCGAG ACCAAGGAAC TGGTCATATT GAAACACAGC
GACCTGGTCA AACACATGGC CCTGAGGCTG TTCTCGAGGC TGCCGGACCA CGTTTCCATC
GACGACCTGA TCAGCGCGGG CGTCATCGGA CTGATCGACG CCGTGGACAA GTACGATTCG
GGCCAGGGCA TCCCGTTCAA GTTCTATGCG AAGATCAGGA TTCGCGGAGC GATGCTCGAT
GAGATTCGCG CCATGGACTG GGTCCCGAGG TCCTTGCGTC AGAAGGGCAA CGTTCTTGAA
AGAACGTTTT CCGCCCTGGA GCAGAAGCTG GGCCGCTGTC CTTCCGACGA GCAGGTTGCG
GGCGAGCTCA ACATCGGGAT CGAGGACTAT CACCGGCTGC TCGACGAGAT CAAGGGCATT
TCGTTTCTTC CCGAGAACAT CAACGAGGCG CTCCTGGAGA ACGGCGAGTC GGGTTCTCTG
GCGTCCGATT CCGAGGAGCT CTTTCAGCAT GCCTACCGGC AGGAGATCCA GCGCCATCTC
GCAGACGCCA TCCGGACCCT GACCGAGAAG GAGCAACTCG TCTTGTCCCT GTATTACTAC
GACGAACTGA CGATGAAGGA AGTCGGCACG GCGCTCGGCT ACACGGAATC ACGCATTTCG
CAGATCCACA CCAAGGCCAT CATCAAGCTG CGCAGCCGGC TTGCCAAGAG GCTCACCGCC
GACGATCTGC CGCCCTACAT CGGGTCCAGG GAGACGTGTT CGGCCGGTTC TCCCAAGTAA
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| Protein sequence | MHDSAGKRDA MEPMRSMTQN PCPIEDAGGE TKELVILKHS DLVKHMALRL FSRLPDHVSI
DDLISAGVIG LIDAVDKYDS GQGIPFKFYA KIRIRGAMLD EIRAMDWVPR SLRQKGNVLE
RTFSALEQKL GRCPSDEQVA GELNIGIEDY HRLLDEIKGI SFLPENINEA LLENGESGSL
ASDSEELFQH AYRQEIQRHL ADAIRTLTEK EQLVLSLYYY DELTMKEVGT ALGYTESRIS
QIHTKAIIKL RSRLAKRLTA DDLPPYIGSR ETCSAGSPK
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