Gene Sfum_1382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1382 
Symbol 
ID4461236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1717834 
End bp1718289 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content60% 
IMG OID639702150 
ProductNusB antitermination factor 
Protein accessionYP_845508 
Protein GI116748821 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCGAC GCAGGCGTTC TCGAGAAATG GCACTGCAGG TGCTGTACCA GATGGAAATG 
GCCGTGCTGC CTCCGGAAGA GGCACTCGGT CTTTACTATC AACTGTTTGA CGACGATGAA
AAACACCGCG TACCCGCGGA GGTGCGACCC TTCGCCGAGG AAATCGTCCG GGGGGTCAGC
CTGCACCGCG CCAGGATCGA CGAAATGATC ACGTCCGCGT CCGAACACTG GAGGCTGGCC
CGCATGTCGC TGGTGGACCG GAACATCCTG AGGATTGCGG TCTTCGAGAT GCTTTTCTGC
TTCGATATCC CCCCCAAGGT TTCCATCAAC GAAGCCATCG ACTTGGGCAA GACTTTCGGC
AGCCCGGATT CCGGGGCTTT CATCAACGGG ATCCTCGACC ATATCCTCCC CCTGTTGGAA
GCCAACGGCC GCATCGACCG GCGCGATTCC GCCTGA
 
Protein sequence
MGRRRRSREM ALQVLYQMEM AVLPPEEALG LYYQLFDDDE KHRVPAEVRP FAEEIVRGVS 
LHRARIDEMI TSASEHWRLA RMSLVDRNIL RIAVFEMLFC FDIPPKVSIN EAIDLGKTFG
SPDSGAFING ILDHILPLLE ANGRIDRRDS A