| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1380 |
|---|
| Symbol | |
|---|
| ID | 4461234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 1716032 |
|---|
| End bp | 1717270 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639702148 |
|---|
| Product | GTP cyclohydrolase II |
|---|
| Protein accession | YP_845506 |
|---|
| Protein GI | 116748819 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II |
|---|
| TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTGTT CAACCATCCC TGAAGCCTTG GAGGACATTC GTCAGGGCAA GATGGTCATC
CTGGTGGACG ACGAGGATCG CGAAAACGAG GGGGATCTGT GCATGGCTGC CGAAATGGTG
ACCCCTGAAG CGATCAATTT CATGGCCAAG TACGGACGCG GCCTGATCTG CCTTTCCCTT
GTTCCTGAAA TGGTCGACCG GTTGCGCCTG CCGATGATGG TCAGCCACAA CCTGTCGCAG
TTTCAGACGG CCTTCACCGT ATCCATCGAA GCCAGGAAGG GCGTTACGAC GGGAATCAGC
GCCGCGGACC GCTGCCACAC CATTCTCACG GCCATCGCCG ACGACGTCAG GCCTGACGAC
ATCGTCAGCC CCGGGCATGT TTTTCCTCTT CGGGCGAAAA AGGGGGGCGT GCTGGTACGG
ACCGGCCAAA CGGAAGGTTC GGTGGATCTT GCGCGCCTGG CCGGGATGAG GCCGGCCGGC
GTCATCTGCG AGGTCATGAA AGACGATGGG ACCATGGCCC GCATGCCCGA CCTCGAGGTC
TTCGCTCGCG AGCATGACGT GAAGATCGTG ACCGTTGCGG ACGTGATCCG GTACCGGATG
GCCAATGAGA TTTTCGTTCA CCGGGCGGCG GTCGCCAACC TGCCGACCTC TTTTGGCGGA
GAATTCACGG TGATTGCCTA CACGAACGAG ATCGACGAGC ATTGTCACCT CGCCCTGGTC
AAAGGCGATC TCACCCCGCA GGACGAAGTC CTGGTGAGAG TCCATTCGGA GTGCCTCACG
GGCGACGTGT TCGGTTCCCT TCGGTGCGAC TGCGGCGGGC AGCTTCGGTC TGCCATGGGC
CAGATCGCAC GGGAAGGCAA GGGTGTCATC CTCTATATGC GCAACCATGA AGGACGAGGC
ATCGGCATCG TGAACAAGAT CAAGGCCTAT GCCCTCCAGG AAGACGGCTA CGATACGGTG
GAAGCGAACG TGGCGCTCGG CTTCGAGCCC GACTTGCGCG ATTACGGCAT AGGCGCCCAG
ATGCTCGTGG ACCTGGGCAT CAAGAAGATG CGCCTGATGA CCAACAACCC GAAGAAGATC
GTCGGATTGC AGGGATATGG GATCACGGTC ACGGGGCGCG TCCCCCTGGA AATCCCGCCA
AATGAAGAGA ATATCAGGTA CTTGACCACG AAGTGCGCGA AAATGGGGCA CATCATGAGT
TGCGTCACGC AAAAGGAAGA ACCCGATGAA AATCTATGA
|
|---|
| Protein sequence | MPCSTIPEAL EDIRQGKMVI LVDDEDRENE GDLCMAAEMV TPEAINFMAK YGRGLICLSL
VPEMVDRLRL PMMVSHNLSQ FQTAFTVSIE ARKGVTTGIS AADRCHTILT AIADDVRPDD
IVSPGHVFPL RAKKGGVLVR TGQTEGSVDL ARLAGMRPAG VICEVMKDDG TMARMPDLEV
FAREHDVKIV TVADVIRYRM ANEIFVHRAA VANLPTSFGG EFTVIAYTNE IDEHCHLALV
KGDLTPQDEV LVRVHSECLT GDVFGSLRCD CGGQLRSAMG QIAREGKGVI LYMRNHEGRG
IGIVNKIKAY ALQEDGYDTV EANVALGFEP DLRDYGIGAQ MLVDLGIKKM RLMTNNPKKI
VGLQGYGITV TGRVPLEIPP NEENIRYLTT KCAKMGHIMS CVTQKEEPDE NL
|
|---|
| |