| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1378 |
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| Symbol | |
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| ID | 4461232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1714012 |
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| End bp | 1715103 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639702146 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_845504 |
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| Protein GI | 116748817 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGG CGTTGCGCCT GGCGGCAAAA GGCGCCGGCC GCACGAGTCC CAACCCCATG
GTCGGGGCGG TCGTGGTGCG TGGAGAAACC ACGGTCGCGG AAGGTTTCCA TGAATTCGTC
GGAGGACCCC ATGCCGAAGT GAACGCACTG CGGCAGGCGG GCGACAAAGC AAGAGGCGCA
ACCTTGTACG TGACGCTCGA GCCGTGCAAT CATCAAGGCA GGACGCCGCC GTGCACGCGG
GCGGTTCTCG ATTCCGGCGT CGCCACGGTC GTGATCGGCA TGGAGGATCC CAACCCGGGA
GTCCGGGGAG GCGGAGCTTC CTTTCTCAGG TCTCACGGTC TGCGGGTCCA CGCGGGCATT
CTCGAAAAGG AATGCCGCGC GCTCAATCAG CCCTTCATCA AGCATGTCAC CACCGGCCTT
CCCTACGTGA CCCTCAAGGC CGCGGTCACC CTCGACGGAG CGATCGCCTC CTCCTCGGGC
GATTCCAAAT GGATCAGCAA CGAGCGGTCC AGAAAGTTCG CACACCACCT GCGCTGCATT
TCCGACGGGG TCCTGATCGG CATCGGGACG GCCCTCGCGG ACGATCCCCT GCTTTCCGCA
AGAATCAAGC GAAGACCCGC CTGCCGGCAG CCCGTGCGCA TCGTCCTCGA CTCCCGCTTG
CGTTTGCCTC TGGAAAGCGC CCTGGTGCGC ACCGCCGCGG AATTCCCCCT CATGGTGGTC
TGCGGACGGG ATGCTCCGCC CACGAGGGAA AAGGCTCTCG TGGATGCGGG CGCCGAGGTG
ATGCGCCTGT CTTCCGGCAA GGGAGGGATT CATCTCCCCG AACTGCTCAG GGCGCTCGGG
TCGAAGGGAC TCTGCAGCCT GCTGGTGGAG GGAGGCGCCA CGGTGCTCGG CGCTTTTCTG
GACAACGGCC TGGCGGATGA TTTCCATTTT TTCTACGCCC CCAAGGTTCT GGGCGATCCG
GCGGGAACTC CCATGGTCCG CGGCAGGGGC CGCGAACGCA TGGCGGACGC CGTGCCCGTA
TTCGACGTGC GTGTCAGGCG TTTCGGAGAG GATGTCATGC TATCCGGAAG ACTGACCGAA
CACCTTTACT GA
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| Protein sequence | MKRALRLAAK GAGRTSPNPM VGAVVVRGET TVAEGFHEFV GGPHAEVNAL RQAGDKARGA
TLYVTLEPCN HQGRTPPCTR AVLDSGVATV VIGMEDPNPG VRGGGASFLR SHGLRVHAGI
LEKECRALNQ PFIKHVTTGL PYVTLKAAVT LDGAIASSSG DSKWISNERS RKFAHHLRCI
SDGVLIGIGT ALADDPLLSA RIKRRPACRQ PVRIVLDSRL RLPLESALVR TAAEFPLMVV
CGRDAPPTRE KALVDAGAEV MRLSSGKGGI HLPELLRALG SKGLCSLLVE GGATVLGAFL
DNGLADDFHF FYAPKVLGDP AGTPMVRGRG RERMADAVPV FDVRVRRFGE DVMLSGRLTE
HLY
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